Malus domestica (apple): 103413389
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Entry
103413389 CDS
T03194
Name
(RefSeq) protein SLOW WALKER 1-like
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
mdm
Malus domestica (apple)
Pathway
mdm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103413389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdm03009
]
103413389
Ribosome biogenesis [BR:
mdm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103413389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
EIF3I
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Utp12
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
103413389
NCBI-ProteinID:
XP_008350075
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Position
11:39588055..39589704
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AA seq
549 aa
AA seq
DB search
MAEPQISKTFPVKPKHKPKPRSPKQSPESKYWSSFKTKQIPDLISAITSLTFSPNAPHSF
AAAHSASLILYNPLNQFSPTATISAFRDVVSSASFRCDGLLVAAADLSGLVQVFDVKTRN
PLRKLKSHTRPARFVKYPASDKLHLVSGGDDAIVKYWDVAGETPISDLLGHKDYVRCGDC
SPVSSDMFVTGSYDHTVKLWDVRVRDSGSVMEVNHGKPVEDVIFLPSGGLIATAGGDSVK
IWDLMAGGKMVYSMESHNKTVTSICVAKIGKDSGEEAQQYRILSVALDGYMKVFDYSKMK
VTHSMRFPAPLMSVGFSPDCMTRVIGTSNGMIYAGRRKYKEGAGGGSDEELDRPLSKYEK
REKRLKALGDAGGLGPVMEEPQIRVLRPSNFRYFHRGQGEKPSERDYVVMRPKKVKLAEH
DKLLKKFRHKDALVSVLRGKNPENAVAVMEELVARNKLLKCVLNLDSEELELLLKFLQKH
LTVPSYSGLLMGLTKKVLEMRTEDIKASEALKGHIRNLKRSVEEEIRIQQSLQEMQGIIS
PLLRITGRR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccacaaatctccaagaccttccctgtgaaacccaagcacaagcctaagccc
cgaagtcccaaacaatcccccgaatccaaatactggtcctccttcaaaaccaagcaaatc
cctgacctcatctccgccatcacctccctcaccttctcccccaacgccccacactctttc
gccgccgcccactccgcctccctcattctctacaaccccctaaaccaattctcccccacc
gccaccatctccgccttccgcgacgtcgtttcttcagcctcattccgctgcgatggcctc
ctcgtcgccgccgccgacctctctggcctcgtccaggtcttcgatgtcaaaacccgaaac
ccgcttcggaaacttaaatcccacacgcgcccagctcggttcgtcaaatacccagcttct
gacaagctccatttggtctccggcggcgacgatgccattgtcaagtactgggacgtcgcc
ggcgagactccgatttccgacttgctcggccacaaggactacgtgcggtgcggggattgc
tcgccggtcagttcggatatgtttgttactgggtcttatgatcacacggtgaagctttgg
gatgtgagggttagagattcggggtcggtgatggaggtgaatcacggaaagccggtggag
gacgtgattttcttgccatccggtgggttaattgcgacggctggcggcgattccgtgaag
atatgggatttgatggcaggtgggaaaatggtgtattcaatggagagccacaataagact
gtgacttcgatttgcgtcgcgaaaatcggaaaggacagcggggaggaggcgcagcaatac
aggattttgagtgtggcattggatggttacatgaaggtgtttgattattcaaagatgaag
gtcactcactcaatgcggttccctgcgccgctaatgtcggtagggttttcgcccgattgt
atgacgagggtgattggaacttcgaacgggatgatctatgccgggaggaggaagtacaag
gaaggcgcagggggcggttctgatgaggagctagataggccgctttcgaagtatgagaag
agggagaaaaggttgaaggccttaggggatgctgggggtttgggacctgtgatggaggaa
ccgcagattcgggttttaaggccttcgaattttcggtatttccatagagggcaaggggag
aagccgtccgagcgggactatgtggtaatgaggccaaagaaagtgaaattggccgagcat
gacaagctattgaagaagtttaggcacaaggatgctctggtgtctgtcttgcgcggcaag
aatccggagaatgccgtggcggtgatggaggaattggtggcgaggaataaactgctgaaa
tgcgtgttgaatttggattcggaggagctggaattgctgctcaagttcttgcagaagcac
ttgaccgtgccaagttactcggggttgttgatggggttgacaaagaaggttcttgagatg
aggactgaggacattaaagcttccgaagcgttgaagggccatattcgaaaccttaaacgg
tctgttgaggaggaaattcggatacaacagtcgttgcaggagatgcagggtataatttct
cctctgttgagaattactggaagaagatga
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