Malus domestica (apple): 103413446
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Entry
103413446 CDS
T03194
Name
(RefSeq) syntaxin-132-like
KO
K08486
syntaxin 1B/2/3
Organism
mdm
Malus domestica (apple)
Pathway
mdm04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103413446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103413446
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdm04147
]
103413446
Membrane trafficking [BR:
mdm04131
]
SNARE
Syntaxin (Qa)
Stx-PM
103413446
Exosome [BR:
mdm04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
103413446
Exosomal proteins of other body fluids (saliva and urine)
103413446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
SteA-like_C
Stonustoxin_helical
DUF8180
FUT8_N_cat
DUF6548
DUF5790
DUF3232
TPR
DUF1218
Fusion_gly
COLEC12
PHM7_cyt
Toprim_2
DUF2383
Motif
Other DBs
NCBI-GeneID:
103413446
NCBI-ProteinID:
XP_008350131
LinkDB
All DBs
Position
12:join(782886..782903,783726..783836,784023..784079,784402..784450,784767..784855,784945..785018,785212..785254,785346..785406,785510..785535,785618..785695,785900..785980,786359..786424,786597..786770)
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AA seq
308 aa
AA seq
DB search
MNDLLKDSFEISRGQALRDGDIELGAHASMNSGELGLEDFFKKVQEIEKQNEKLDKLLKK
LQDAHEESKAVTKVPSMKSIKQRMEKDVDEVGKVARWIKSKIEELDKGNLANRQKAGCGK
GTGVDRSRTATTLALKKKLRDKMTEFQTLRDTIHQEYRDVVERRVFTVTGARADEETIER
LIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLDLQQIFLDMAVLVDA
QGDLLNNIETQVSSAVDHVQQGNNALQKAKKLQKSSRKWMCIAILILLIIVAIIAVAVLK
PWSSNNGA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctgctaaaggattcttttgagatctctcggggtcaagctttgagagatgga
gatatcgaactaggagcacatgcttcaatgaattctggagaacttggtttggaggatttt
ttcaaaaaggttcaagagatcgagaagcaaaacgagaagcttgataaacttttgaaaaag
ctccaggatgcacatgaagagtccaaggctgttactaaggttccttccatgaaatcaatc
aagcaacgaatggagaaagatgttgacgaagttggaaaagttgctcgatggataaagtca
aaaattgaagaactcgacaaagggaatttagcaaatagacagaaggctggttgcggaaag
ggaacaggtgtagatagatcccgaacagcaacaacccttgccttgaaaaagaaattaagg
gacaagatgactgaatttcagactctaagggacaccatccatcaagagtatcgtgatgtt
gtcgagaggcgagtttttacagtgacgggtgcaagagctgatgaagagacaattgaaaga
ctaatcgagacaggagacagtgaacaaattttccagaaggcaatccaagaacaagggcga
ggccagataatggacactctggccgaaattcaagagcgacatgatgctgttagagatctt
gagaggaagcttctcgatttacaacagatatttctggatatggcggtgctggtcgatgca
caaggggacttgcttaacaacatagaaacccaggtatcgagtgcggtagatcatgtacag
caagggaacaatgctcttcagaaggccaagaagctacaaaagagttcgaggaaatggatg
tgcattgcgatcctcatccttcttatcatcgttgcaatcatcgcggtggcggtgttaaaa
ccatggagtagtaacaatggtgcttaa
DBGET
integrated database retrieval system
