KEGG   Malus domestica (apple): 103413609
Entry
103413609         CDS       T03194                                 
Name
(RefSeq) ribosomal RNA-processing protein 12
  KO
K14794  ribosomal RNA-processing protein 12
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdm03009]
    103413609
Ribosome biogenesis [BR:mdm03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    103413609
  Pre-60S particles
   Other pre-60S particles
    103413609
SSDB
Motif
Pfam: HEAT_RRP12_N RRP12_HEAT HEAT_GCN1 TOR1L1_N TNP-like_RNaseH_C
Other DBs
NCBI-GeneID: 103413609
NCBI-ProteinID: XP_028946371
LinkDB
Position
12:join(8850118..8850633,8851002..8851524,8852112..8852363,8852789..8852880,8853691..8853901,8854629..8854807,8854897..8855124,8855439..8855623,8856860..8856953,8857057..8857113,8857216..8857350,8858130..8858198,8858434..8858550,8859699..8859860,8859962..8860090,8860204..8860305,8860572..8860651,8860745..8861111)
AA seq 1165 aa
MDEDHHHDLDAVEPFNDVADICQQLMDRYKKSSAPQHRHLLATAAAMRAILAAESLPLTP
PAYFAATISSIDDMSSSASQTLEPTATAALLSFLAMVLPLVPPGSVSSAKAGEAVSMLMG
LLKREEELSMPAVRALVKCLGVLVGFCDLEDWGSIKLGLETLLKFSVDRRPKVRKCSQDC
LENVFKSLQSRTVIKEVSKLILSKLKGYMPLAVELSASQTSDGPKNLEVLHMLNVVKLTI
PFLSKKVGSKLLSEINELVVSRFSTLTRHVLQIIETLFESSRANAIVSETEATIASLASY
VSLGDEVPSDTVMLAATLLKSSLFILHAGESTSWINSLPLVCSSVAGLLTSEASTASHAS
DILKELISQFVDQKSLLVGESQPSDDEAQETMKASALISICTAFEDALRTCKGVPNEHLL
GVISALFLKLGGISYVYMRNILLNLANSMTLASGDKSNTDHLQKCIGTAVIAIGPERILE
LVPISLNASDFTCSNIWLVPILKDYVVGASLGYYMEHIMPLANSFCRASGKVKKSITSQD
LQARARDLLGLLPAFCNLPTDICQKFRPLAEILVTFLKDSLMHENIAVALQVLVNQNKSV
LDQKDGAGDTKSYAVNKSLLEFGNLPTYSKKTATRNIKALTSCSSELLIALTDLFLYSPP
EKRLYLKDAIGCLASVTDSSNAKKIFISLLEKFQFKDSRHELGKLESQTDASAGEEEHNL
STREKDALRCVMMELASSFVKGANEDLIDLIYTFAKDTLLNDDEIAIYEAYHTLSRILEE
HDWFCSSRFAELIDLLLGLRSPVDIISLRSRFASFQTLMIHTLKIDSEVENSKSFLILNE
IILKLKDAKDEAVREAAYDVLLKISVSLRDPSCVSSDGPYQKLINMIMGYLTGASPHIKS
GAVSVLSVLVYKDTDICLSMPDLVPSILSLLQGKALEVIKAVLGFVKVLVSCLETRPLQR
LLPDIVNAVLPWSPVSRHHFRSKVTVIIEILLRKCGTASVQFATPDKYKGFLKGIVESRH
NKKSSKEVAATDIDTGHADTTTNRTEDKKRKRFGKPHEKNGSMEHREMKRLKRHIPNNQR
TNDLHTSGGDGFKWTNKGRQSDRVKSNKDESERSGKTNKEKYSKGPASGFKRKTDSTNTR
KDAAAMPRPHTSSKSFKHKKVGRKN
NT seq 3498 nt   +upstreamnt  +downstreamnt
atggacgaagaccaccaccacgacctagacgcagtcgagccattcaacgatgtcgcagac
atttgccaacagctcatggaccgctacaaaaagtcctcggctccccagcaccgccacctc
ctcgccaccgcggctgctatgcgcgccatcctcgccgccgagtccctccccctcactcca
cctgcctatttcgctgccaccatctcctccatcgacgacatgtcttcatccgcgtcccag
accctagaacccactgccacagcggcgctgttgtcgttcttggccatggtgctcccgttg
gtgcctccggggagcgtctcgtcggccaaggcgggcgaggctgtgtcgatgctgatggga
cttctgaagagagaggaggagctatccatgcccgctgtgagggctttggtaaagtgcttg
ggggttttggtagggttttgtgatttggaggattggggatctatcaaattgggattggag
acgttactcaagttttccgtcgatcggcggcccaaggtccggaaatgttctcaagactgt
ctcgagaacgtttttaagtcgctccagtcccgcactgttatcaaggaggttagcaagttg
atactgtctaagctcaaaggatacatgcctttggcggttgaattaagtgcttcacagaca
tcagatggacctaaaaatctagaggtccttcacatgctaaatgtggtgaaacttaccatt
ccctttctgtcaaagaaagtcggttcaaagcttctctcagaaataaatgagcttgttgtt
tcacggttctcaacactcacaaggcatgtactccaaattattgaaacgttgtttgagagc
tcaagagctaatgccattgtttctgaaacagaggcgactatagcttctcttgcttcatac
gtgtctttgggagatgaggttccctcggacactgtcatgttggcagcaaccttgttaaaa
tcttctttgtttatacttcatgctggagaatcgacatcgtggattaatagtcttcctcta
gtttgtagttctgtggcaggtcttctgacttctgaggctagcactgcatcacacgcttca
gatattcttaaagagctgataagccaatttgtggatcaaaaaagtctgctggtgggtgaa
agccaaccttcagatgatgaagcacaagagactatgaaagcaagtgcactaatatcaatc
tgtactgcttttgaggatgcccttagaacttgtaaaggagtgccaaatgagcatcttttg
ggggttatatcggcattgttcctcaagctcggaggaatctcctatgtctatatgagaaat
attcttctcaaccttgccaactcaatgacccttgctagtggggacaaatctaacaccgat
catcttcagaagtgtattggaactgctgtaattgcaattggacctgagaggatacttgaa
cttgttcctatatctctcaatgctagtgacttcacctgttcaaacatttggttggtacct
attttgaaagattatgttgttggagcatcacttggttactatatggagcatattatgcct
cttgcaaattccttttgtcgggccagtggtaaagttaaaaagtcaataaccagtcaagat
ctacaggctcgtgcacgtgatctgttgggattgctgcctgctttctgtaatcttccaact
gatatatgccaaaaatttcgaccgttggctgagattttagtaacatttcttaaggactcc
ttaatgcatgaaaatattgcagttgccttgcaggttcttgtgaatcagaacaaaagtgta
cttgaccaaaaagatggtgctggtgacacgaagtcctatgcagtaaacaaatctttgtta
gagttcggcaacttacccacttattcaaagaaaactgctaccagaaacattaaggctttg
acatcatgttcttctgagctgcttattgctctaacagacttatttctttattcaccccct
gagaagcgtttatatctaaaggatgccataggatgcttggcttcagtaactgattcttcc
aatgccaagaagatttttatatcattgcttgagaagttccagttcaaagatagtaggcat
gagcttggaaagttggagagtcagactgatgcatcagctggtgaggaagaacacaaccta
agtactagagagaaagatgctctgcgatgcgtgatgatggaattagcatcttcttttgtt
aaaggagccaatgaggatcttattgatctaatatatacgtttgctaaagatactttactg
aacgatgatgagatcgccatttatgaagcatatcatactttgagcagaattctagaggag
catgattggttctgttcttctcggtttgctgaattgattgatctgctacttggtttgaga
tctcctgttgatatcatatctctaaggagtcgctttgctagtttccagactttaatgatt
catactttgaagatagactcagaggtagaaaattcaaagtcgtttcttattctcaatgag
atcatactcaagttaaaagatgccaaggatgaagcagtcagggaggcagcttacgatgta
ctcctcaaaataagtgttagcttgagagatccatcgtgtgtcagttcagatggaccttac
cagaaattaattaatatgataatgggctatcttaccggtgcatcacctcacataaagagt
ggagcagtgtctgtgctatcagtgctggtgtataaagatacagatatttgtctttcaatg
cccgatcttgttccctctattttatctttgttgcaagggaaagctttagaagttataaaa
gctgttttgggctttgtaaaagtactagtatcctgtttagagactagacctctgcaacgg
cttcttcctgatattgtcaatgcagttctcccatggtcaccagtttcgagacatcatttc
agatcaaaggttacagtcataatagagattttgttaaggaagtgcggtactgcatcagtt
cagtttgctacacctgataaatacaagggtttcctgaagggcattgtggagagccgccat
aacaagaaatcttccaaggaagttgcagcaaccgatatagacacgggtcatgcagacact
acaaccaacaggacggaggataaaaagcgcaagagatttggtaagccacatgaaaagaac
ggatcaatggaacatagagagatgaaaaggttgaagagacacattcctaacaaccagaga
accaacgaccttcatacttctggcggtgatggattcaagtggactaataaaggtaggcaa
tctgatcgagtaaaatcaaataaagacgagtcagaaagaagtggaaagacaaataaagag
aaatatagtaaaggtcccgcaagtggcttcaagaggaagacggatagcacaaatacgagg
aaggatgcagctgcaatgcctagacctcacacttcatccaaatcattcaaacacaagaag
gttgggagaaaaaactag

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