Malus domestica (apple): 103413818
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Entry
103413818 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
103413818
Enzymes [BR:
mdm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
103413818
Transfer RNA biogenesis [BR:
mdm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103413818
Prokaryotic type
103413818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF7261
Motif
Other DBs
NCBI-GeneID:
103413818
NCBI-ProteinID:
XP_070670266
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All DBs
Position
15:join(333411..334822,334926..335241)
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AA seq
575 aa
AA seq
DB search
MECPPPTLTSPTHITDNPDTKPTRSPPSPWPQEPDPKKLKMSTTTTSDDEEATAAATNAA
KTPRYKRRKVAIFFAYLGVGYQGMQKNPGAKTIEGDLEEALYLSNAVPEQDRNSPKRYDW
ARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSNLSPQIRIFGYKRVTASFNAKKFCDR
RRYVYLIPVFALDPSAHRDRGSVLASLGSDQEFVKCLECSERGRKVGGLMGKRTYELRGT
NFEVSISSNTNESMVESEIGEKFRVLPGNAGCDNLISETRNEVSLSINEEIKVLTENAGV
DNSNSELKTEISISINNNEVTEIEVENNRVVPNEAEAADLNSESLDDTNVSFGEEKANEK
ENTEEGSGKGNGFCYGEKERERFNKILNSYEGTHNFHNFTTRTKAVDPAAQRYIISFNAN
TTVTVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIFRGCAPESLLERALQKDVNINVPTA
PEVGLYLDECFFSSYNQKWGDSHEELSMKGYEQEAEDFKMKHIYTHIASTEHKEGVVGLW
LHSLNHRNYPDLGPAENNGNTSNGISADTGNVVAE
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtcctccaccaacgttaacaagccccactcacatcactgacaatccagatacg
aaacccactaggtcaccgccgtcgccgtggccacaagagcccgaccccaagaagctcaaa
atgtccaccaccaccaccagcgacgacgaagaagctaccgccgccgccaccaacgccgct
aaaacgccacggtacaagcgccgaaaggttgcaatattcttcgcttatttaggcgtcgga
taccaaggaatgcaaaagaatccaggcgccaaaaccatcgagggggacctcgaagaagct
ctctacctttccaacgccgtccccgagcaggaccgcaacagccctaagcgctacgactgg
gcccgctccgcccgcaccgataagggggtcagcgccgtcggccaggttgtctcgggccgc
ttctatgtcgatccgccgggattcatcgaccgcctcaattcaaacctttctcctcagatt
cggattttcggctacaaacgcgtcacggcgtcgtttaacgcgaagaagttctgtgatcgg
agaaggtatgtgtatctgattcccgtatttgctcttgatccttctgctcatcgcgataga
gggagcgtgttggctagtcttgggtctgatcaggagtttgttaagtgcttggagtgctcc
gagagagggcgtaaagtcgggggcttgatgggtaagcgcacgtatgaattgagaggtacg
aattttgaggtaagcatttcgtccaacaccaatgagtctatggttgaatctgaaattggt
gaaaaatttagggttcttcccggaaatgctggctgtgataatttgatttctgagaccaga
aatgaagttagccttagcattaatgaagaaattaaggttcttacggagaatgctggggtt
gataattcgaattctgaactcaaaactgaaattagcattagtattaataacaatgaggtt
actgaaattgaggttgagaataatcgagtggtccccaatgaggcagaggctgctgatttg
aattcggagtcactagatgatacgaatgttagttttggtgaagagaaggctaatgaaaaa
gagaatacagaggaaggaagtggaaaaggaaatgggttttgttatggtgagaaggagagg
gaaaggttcaacaaaattttgaatagttatgaggggactcataacttccacaacttcacc
accagaactaaagctgtagaccccgctgctcagcgctacattatttcattcaatgcgaac
accacggttacagttgagggtatggaattcgttaagtgtgaggttgtggggcagagcttc
atgcttcatcagattaggaagatgatcgggcttgcggtggcaatcttcaggggatgtgct
ccagagtcattgctcgaaagagcattgcaaaaggatgttaacatcaatgtgccgacagct
cctgaagttggattgtacttggatgagtgcttcttttcgtcatataaccagaaatgggga
gacagtcatgaagagctgtcaatgaaaggctatgaacaagaggcagaagacttcaagatg
aagcatatatacactcacatagcatccaccgagcataaagaaggtgttgtgggtctctgg
ttgcactccctcaaccaccgtaactatccggatttaggtcctgctgagaacaatggaaat
accagcaacggaataagtgctgatacgggtaatgtcgttgctgagtaa
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