Malus domestica (apple): 103414744
Help
Entry
103414744 CDS
T03194
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103414744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103414744
03110 Chaperones and folding catalysts [BR:
mdm03110
]
103414744
03029 Mitochondrial biogenesis [BR:
mdm03029
]
103414744
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdm04147
]
103414744
Enzymes [BR:
mdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103414744
Messenger RNA biogenesis [BR:
mdm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103414744
Chaperones and folding catalysts [BR:
mdm03110
]
Heat shock proteins
HSP60 / Chaperonin
103414744
Mitochondrial biogenesis [BR:
mdm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103414744
Exosome [BR:
mdm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103414744
Exosomal proteins of other body fluids (saliva and urine)
103414744
Exosomal proteins of breast cancer cells
103414744
Exosomal proteins of colorectal cancer cells
103414744
Exosomal proteins of bladder cancer cells
103414744
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
103414744
NCBI-ProteinID:
XP_008351333
LinkDB
All DBs
Position
03:join(247167..247391,247487..247612,247940..248077,248155..248250,248396..248638,248726..248960,249136..249305,249400..249477,249573..249644,249750..249854,249972..250064,250155..250247,250361..250487,250573..250586)
Genome browser
AA seq
604 aa
AA seq
DB search
MASTFAAMTSVGSLAAPSRVIDRKFDNLSSRASISSFSLSRRQHVAMRRTRAPRICAMAK
ELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVEL
EDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEK
TTRALVNELKLISKEVEDSELADVAAVSAGNNYEVGNMIAEALSKVGRKGVVTLEEGKSA
ENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINILEDAIRG
GYPVVIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGDRKSQYLDDIAILTGGTVIRE
EVGLTLENVGKEVLGHASKVVLTKDTSTIVGDGSTQEAVNKRVAQIKNLIEAAEQDYERE
KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLA
SKVDAIKDTLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNA
ATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAVPAGNPMDNS
GYGY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacatttgcagccatgacttcagttggttcgttggctgctcctagccgtgtc
attgacaggaaattcgacaacttgtcgtctcgtgcttcaatctcttcattctctctctct
aggaggcaacatgtggctatgaggaggacacgagctcccaggatctgcgccatggccaag
gaattgcacttcaacaaggacggctctgccatcaagaaattacagactggtgtcaacaag
ctcgccgaccttgttggggttacacttggtccaaagggaaggaatgtcgttctagagagc
aagtatggctcccccaaaattgttaacgatggtgtaaccgtcgcaaaagaggttgagttg
gaggaccctgttgagaatattggagctaagttagtgagacaggcagctgccaagactaat
gacctggctggtgacggtacaaccacttctgttgttcttgcacaaggtcttattgctgaa
ggtgtcaaggtggttgcagctggggcaaaccctgttttaatcacacgtggcattgaaaag
accactagagccctagtaaatgagcttaagttgatctccaaagaggttgaagacagtgag
ctggcagatgttgcagctgttagtgcaggaaacaattacgaagtaggaaacatgattgct
gaagctttgagcaaggtgggtaggaagggtgtggtgacccttgaagagggaaagagcgct
gagaacagcctgtatgttgttgagggaatgcaattcgatcgtggttatatctcaccttac
tttgtcactgacagtgagaaaatggcagttgaatatgagaactgcaagttgcttcttgtt
gataaaaaaattacaaatgcaagggaccttattaacattttggaggatgctattagagga
ggatacccagttgtaatcattgcagaagacattgaacaagaagctcttgcaactcttgtt
gtaaacaagctaagaggagctcttaagattgctgcccttaaagctcccgggtttggtgat
cgcaagagccagtaccttgatgacattgctattctaactggaggaactgtcatcagagag
gaagtaggactcacattagagaatgttggaaaggaggtcctaggccatgcatcgaaagtg
gttcttacaaaggatacctccacaattgttggtgatggaagtactcaggaagcagttaac
aagcgagttgcccaaattaagaacctcattgaggcggccgagcaggactatgaaagagaa
aagcttaatgaaaggattgcaaaactatctggtggtgttgctgttatacaggttggagca
caaacagagacagagctgaaagaaaagaaactgagagttgaagatgctctgaatgcaaca
aaggcagctgttgaggaaggtattgttgtcggaggtggatgcacacttctgaggttagca
tcaaaggttgacgcaatcaaagatactcttgataatgatgaagaaaaggttggagcagat
atcgttaaaagagctcttagttaccctctgaaattaatcgccaagaatgctggtgtaaat
ggaagtgttgtcagtgagaaggtgctttcgagtgacaatccgaagtatggatataatgct
gccactggaaactatgaagatttaatggctgctggaatcattgatccaaccaaggtggtg
agatgttgcctagagcatgcatcctctgttgcgaaaactttcttaatgtcagattgtgtg
gttgttgagattaaagagccagaacctgcagtgcctgccggcaaccccatggacaactca
ggctacggttactaa
DBGET
integrated database retrieval system
