Malus domestica (apple): 103415108
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Entry
103415108 CDS
T03194
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103415108
03041 Spliceosome [BR:
mdm03041
]
103415108
03036 Chromosome and associated proteins [BR:
mdm03036
]
103415108
Enzymes [BR:
mdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103415108
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103415108
mRNA cycle factors
Common to processing body (P body) and stress granule
103415108
Spliceosome [BR:
mdm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103415108
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103415108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
103415108
NCBI-ProteinID:
XP_008351686
LinkDB
All DBs
Position
03:join(587097..587855,587936..588019,589161..589403,589691..589858,590012..590125,590949..591455)
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AA seq
624 aa
AA seq
DB search
MRTSWADLAANSAAENVGSGSSGNVGSGSAPAPAPASNRSTYVPPHLRNRPPSSDPPAPA
YTAPVTNDRGGPGGFSAPRWGGPRNDNSRTGYGGNAGRGGGWGSRSGGWDGRAREVNPFR
DDDETEQPFSEQENSGINFDAYEDIPVETSGDNVPTPVNTFADIDLGDALNKNIQRCKYV
KPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQPAQRPPRGAHTVHPL
ALILSPTRELSIQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLV
DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKE
IQRLASDFLAKYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLIHAQRANGAQGKQA
LTLVFVETKKGADSLEHWLCMNGFPATTIHGDRSQQEREQALRSFKSGNTPILVATDVAA
RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSLARSLAELMQE
SNQEVPAWLSRYAARASFGGGRNRRSGGGRFGGRDFRRDSSFSRGGNDYYGGGGGGSSGG
YGGASGGYGGASGGYGAGVASAWD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcatgggcagatttggctgcaaattctgcagctgagaatgtaggttctggc
tcttctggcaatgttggttcagggagtgctcctgctcctgctcctgcttctaatcggtcc
acctatgtccccccacatctccgtaaccgtccaccttcctcggacccacctgctccagca
tatactgcgccggttaccaatgatcgaggtggcccaggtgggttcagtgcacctcgttgg
ggtggtcccagaaacgacaacagtcgaactggctatggtggcaatgctggtcgtggtgga
ggatggggaagcaggagtggtggttgggatgggagagcacgagaagtgaacccctttaga
gatgatgatgaaacagagcagccgtttagtgagcaagagaacagtggtattaactttgat
gcatacgaagatattccggttgagacaagtggcgataatgttcccactcctgtgaatacc
tttgcagatattgacttgggggacgcacttaataaaaatattcagaggtgcaaatatgtg
aaacccacacctgtgcagcgtcatgccattcctatctcccttgcaggccgagacttgatg
gcatgtgcccaaactggttctggaaagactgctgctttctgtttcccaatcatcagtgga
attatgaagggacaacctgcacagagaccaccccgtggtgcacatacagttcatccgctt
gctctcattctatctcctactagggagctttcaattcaaattcatgaggaagcccggaaa
ttttcgtatcaaacaggtgttagggtggttgttgcgtatggaggagcaccaattaaccaa
cagctgcgggagcttgaaagaggtgttgatattcttgtggcaactcctggaagattggtg
gatttgctggagagagccagggtttcgttgcagatgattagatatttagccctagatgag
gctgatcgaatgctggatatgggttttgaaccacaaataaggaaaattgtggagcaaatg
gacatgcctcctccaggtatgcgacagactatgctgttcagtgccacttttccgaaggaa
atacagagactggcctctgattttcttgcaaagtacatctttctggcggttggaagggtg
ggttctagtactgatttgattgtccaaagagtggaatttgtgcatgaatctgataaaaga
agtcacctcatggaccttattcatgcacagagggccaatggcgcacagggcaagcaagct
ctgacattagtttttgtggagacaaagaagggagctgattcgctggaacattggctgtgt
atgaatggttttcctgcaactactattcatggtgacagatcacagcaggaaagagaacaa
gcattgaggtcatttaagagtgggaacactccgatcttggtggctactgatgtggctgca
cgtgggctagacattcctcatgttgcacatgttgtcaactttgatcttccaaatgacatt
gatgattatgttcaccgcattggtcgtacgggacgagctgggaagtctggcttggctact
gccttctttaatgagaacaattcatcacttgctaggtctttggcagaattgatgcaagaa
tcaaatcaagaagtacctgcttggctgtcccggtacgcagctcgagcttcttttggtggt
gggaggaaccgtcgttctgggggaggccggtttggtggccgtgacttccgaagggattcc
tctttcagcaggggtggcaatgattactacggtggaggtggtgggggtagcagcggtgga
tatgggggtgcttctggtggatatgggggtgcttctggaggatatggtgctggggtggcc
agtgcgtgggactaa
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