KEGG   Malus domestica (apple): 103415348
Entry
103415348         CDS       T03194                                 
Name
(RefSeq) DNA mismatch repair protein MSH2-like
  KO
K08735  DNA mismatch repair protein MSH2
Organism
mdm  Malus domestica (apple)
Pathway
mdm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    103415348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103415348
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     103415348
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II
Other DBs
NCBI-GeneID: 103415348
NCBI-ProteinID: XP_028948970
LinkDB
Position
14:join(29523683..29523731,29523862..29523911,29524133..29524165,29524298..29525371,29525536..29526090,29526163..29526273,29526378..29526467,29526577..29526648,29526839..29526949,29527098..29527224,29527323..29527525,29527738..29527890,29528347..29528547)
AA seq 942 aa
MDANFEDHSKLPELKLDAKQSQGFLSFFKTLPNDSRAIRLFDRRDYYTAHGENATFIAKT
YYRTTTALRQLGSGSNGLSSVSVSKNMFETIARDLILERTDHTLEIYEGSGSSWRLVKSG
TPGNLCSFEDVLFANNEMQDTPVVVALLPNFQENGCTVGLGYVDLTKRVLGLAEFIDDSH
FTNVESALVALGCKECLLPLESGKTSEIRTLHDALSRCGVMLTERKKTEFKMRDLVQDLS
RLVKGSIEPVRDLVSGFEFAPGALGALLSYAELLADESNYGNYSIQRYNLDSCMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINSRLDLVQAF
VEDPALRHDLRQHLKRISDIERLMHNLEKKRAGLQHIVKLYQSCIRLPYIKSALERYDGQ
FSSLTKERYWEPLELWTDDSHLNKFISLVEAAVDLDQLENGEYMISSSYDPTLSALKEEQ
ESLEHQIHTMHKQTANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLTTQFIVLE
TRKDGVKFTNTKLKKLGDQYQTIVEEYKNCQKELVNRVVQTATTFSEVFWSVAGLLSELD
VLLGFADLASSCPTPYTRPVIMPPDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDAANISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
FHELTELAHENGVQEANMKQIVGVANYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIQVA
EFANFPESVVSLAREKAAELEDFSATPVTPNDAGEEVGLKRKREPDSDDMSRGAARAHKF
LKEFSDLPLETVDLKQALQKVGKMKDELQKDAANCQWLQQFF
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggatgccaattttgaggaccacagcaagcttcccgagctcaagctagatgcaaagcaa
tctcaagggtttctctcattcttcaaaaccctccccaatgattcaagagctattcgattg
tttgatcgacgggactactataccgcgcatggtgaaaatgccactttcattgcaaagacc
tactaccgtaccaccactgctttacgacagttgggtagcggatccaatggcctatccagt
gtgagtgttagtaaaaacatgtttgagacgattgcacgtgatctaatactggaaagaaca
gaccatactcttgagatttatgagggtagtggctcaagttggaggctggtgaaaagtgga
acccctggaaacctttgcagtttcgaagatgttttgtttgccaacaatgagatgcaggat
accccagtggttgttgcgctattacctaactttcaggaaaatggttgcacagttgggtta
ggatatgttgatctaactaaacgagtacttggattagctgaatttattgatgatagtcac
tttacaaatgtggaatcagctttagttgcacttggttgcaaggaatgccttctgcctctg
gagagtggcaaaactagcgaaattagaacattgcatgatgcattgagtagatgtggtgtg
atgttaaccgagaggaagaagactgaatttaagatgagggatttggttcaggatctcagt
cggcttgtcaaaggctccattgaaccagttagagatttagtgtcggggtttgagtttgca
cctggtgcattgggggcattgctctcttatgcagaattacttgctgacgagagcaattat
ggaaattatagcattcaaagatataatcttgacagctgtatgaggctagattctgctgct
atgagggcacttaatgtcctggaaagcaaaaccgatgcaaacaaaaatttcagtttgttt
ggtcttatgaataggacttgtactgctggaatgggtaaaagattactgcacatgtggctc
aaacagcctttattggatgtaaatgaaatcaactcaaggttagatttggtacaagcattt
gtggaggatcctgcacttcgccatgatttgaggcagcatctgaaaagaatttcagacatc
gagcggctaatgcacaatcttgagaagaaaagagctggtttgcagcatattgtaaaactt
tatcagtcgtgtataagacttccctacattaagagtgccctagaacgctatgatggacag
ttctcctcactgaccaaggaaaggtattgggaaccccttgagttatggactgatgatagc
cacttaaataagttcatttctctggtggaagctgctgttgaccttgatcaacttgagaat
ggagagtacatgatatcatctagttatgaccccacactttctgcactgaaggaagagcag
gagtcattggagcaccaaatacacactatgcataaacaaaccgccaatgatcttgatctt
gctgtagataaggctttaaaattagataaaggcacacaatttggacatgtctttagaatc
acaaagaaggaagagccaaaagtaaggaaaaagctcacaacacagttcattgttctggaa
acccgaaaggatggagtgaaatttaccaacacaaagcttaaaaagttaggggatcagtat
caaacgatagttgaagagtataagaattgtcagaaagagcttgttaaccgagttgttcaa
actgcaacaactttctctgaggtgttctggtctgtagctgggttgctctctgaattggat
gtcttacttggttttgctgatttggcttctagctgtcctactccttacactaggccagtc
atcatgccaccggatgaaggggatataatattagaagggagtagacatccctgtgtggag
gctcaggactgggtgaattttatacccaacgattgtaaacttgtgagaggaaagagttgg
ttccaaatcatcacaggacccaatatgggtggcaaatcaacatttatccgacaggttggt
gtgaatattctgatggcacaagttggttgtttcgttccttgtgacgcagctaatatttct
gttcgtgattgcatttttgcacgggtgggagctggcgattgccaactacgtggagtttct
acctttatgcaagaaatgcttgagactgcatctatactgaaaggagctacagacaagtca
ctgataatcatcgatgagttaggccgagggacttcaacttatgatggattcggtttagct
tgggccatttgtgaacaccttgttgaagtgattaaagcacctaccttgtttgcaacccac
ttccatgaattaactgaattagctcatgaaaatggcgttcaggaagctaatatgaagcaa
attgttggcgtagcaaactatcacgttagtgcgcatattgactcatcaagccgcaagttg
actatgctgtacaaggttgagccaggagcttgtgatcaaagtttcggtattcaggttgca
gagtttgcaaactttcctgaaagtgttgtttcccttgctcgagaaaaagctgctgaattg
gaggatttctctgctactccagtcacgccaaatgatgctggagaagaggttggattgaag
cgtaagagagagcccgactctgatgatatgtccagaggagctgctcgggcgcacaagttt
ctgaaggagttttcggatttgcctctggagacagtggatttaaaacaggcattgcaaaag
gttggcaagatgaaggatgagttgcaaaaggatgcagcaaattgtcaatggctccagcag
tttttctag

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