KEGG   Malus domestica (apple): 103415639
Entry
103415639         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K24155  rabconnectin-3a
Organism
mdm  Malus domestica (apple)
Pathway
mdm04142  Lysosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    103415639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103415639
Membrane trafficking [BR:mdm04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    103415639
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    103415639
   RAVE complex
    103415639
SSDB
Motif
Pfam: Rav1p_C WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML WDR55 WD40_CDC20-Fz Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_TEP1_C EIF3I WD40_MABP1-WDR62_2nd Beta-prop_VPS8 RIM2a_ZnF
Other DBs
NCBI-GeneID: 103415639
NCBI-ProteinID: XP_008352201
LinkDB
Position
01:complement(join(19152841..19152936,19153051..19153229,19153328..19153597,19153748..19153881,19154413..19154636,19155427..19155855,19156752..19156808,19156975..19158366,19158471..19158863,19159484..19159729,19159850..19160122,19160363..19160527,19160997..19161225,19161953..19162412,19162663..19165395,19165903..19166308))
AA seq 2561 aa
MPDADAPSASQTSISAVGPTHHLPLQILRSDPTPPAPTRSDPPGSTIDWLPDFLEFSWVA
YGASSLLVISHFPSPLSDTETLIGPIFRQVFELSGDPSSAVEAVSWSPAMPSIGELAAAA
ENCVWVFSHDSATSKGSFCWSQNAVLVQSTKVKAIRWTGSGDGIVSGGVEVVLWKRNGRF
WEIAWKFKAELPQSMVTATWSLDGPFATAAYQSKWQTEGLSTNKASKCVLVCQSDGKSGF
LKSDLHHPHAVSMIQWRPSTDRHLNRDARHPPRQVLLTCSTDGTIRLWCEVNDGRGRKFG
KDMNDPKTMRCSFSVAAVIEINQALNGLLGTDIYVMWATEIGGVCKTREGSKQIFSTKGY
LQDLAGNCEWLIGFGPGMLVNFWAIHCLDDVSPIRFPRVTLWKTQKLQGLKVGNSNWTGL
SNCKDGIPLNKVVISRNSLSGPPTLCSLVQLLPCNSLVWSRIHTQTSNNIEDTPINKSGA
ENIISCSAGGLLNLDGHAGRILQVDVHPYSCEVELAVSLDSCGLLLFWFFSTISNCILDR
PTLIPTWELCGKLATQGSCSKYTSLRWAPSIGNEAVILLMGHAGGIDCFVVKIHHNEEES
IECHYLCTIPFTGHGPYVDGPASIFSIPLPSTCPKTLKSNKLLLLGVWMNGFQALSWEIT
LHSFDLSRSYCECNFDAGNASEGSMWGFETTFADKRYCLNVKPCSSQIPDPHTHDEVTSF
AVVYPGRKICMEKNLASIIDLCYPPYIMATGCSDGSLKLWRSVMDKPSTPHIPWELVGKF
QAHQGPISHVCLSDCGRKIATLWKELSSNTVSTLHIWDSVLLAGAGSFMLEHTISFGQDL
VALNWLSFGNGQLLLGVCTKNQLQVYSQQRCGGQTLLNSEKSLKRDIWVCIASTHTFPLI
NDFFWGPRASAVFVHSSYFCVNSQWLFLADKKHLVNVDPSYIMENCLDSVGGMEEDISSG
IFIDCGLGQFSKILLDNNRRDCKSDIPLEIDLKKDYLSSSLFVARAQLKCSGATKVSIWT
MHEVVEQLSGSLPVYHPEALFMNIYSGNWKRAYIALRHLNEFLSSNSSPERKCSPAKSSN
CIPQIPLSNFLDAHISINSNDKGFQWSGDASVFSSSSPFQRGFGQFTNSLDSYGSSNMIN
SSSTKSELNDFIEPFEKLYKSADISDIEKIQILAIIDLLTELCSSNSSSAYESLDEPGRR
FWVGLRFQQLHFFRKSGRSASVEELVIDSKLIGWAYHSDCQENLFGSFLPNDPSWQEMRN
LGVGFWFTNTAQLCSRMEKLARLQYLKRKDPKDCALLYIALNRIQVLSGLFKISRDEKDK
PLVGFLSRNFQEEKNKAAALKNAYVLMGRHQLELAVAFFLLGGDTSSAVNICAKNLGDEQ
LALVICRLAEGRGGPLERHLITKFMLPSAIEKGDCWLGSLLEWELGNYSQSFTCMLGFQI
NSATEKYALLSNGAPFSDPNVGLYCLMLATNNCMKNAVGEQNSALIGRWAILTTATALNR
CGLPLEALEYLSSSPNIPGDTDERGTSDLGHSENLRAILNPSPRNSSNWLSSNVALHLEF
QAKSDLTLQYLSKLVREHPSWVDIVFGSFQASTCVKECKNQEYVKVLESFQQKLYTTLNQ
LEQKFSVVPFHLVSMILISLYDCGLWFVGYDILHRYTAQNQDLDKIQTADKFLSYALMHK
PLLKATRETSLLFSRVIVACGITCSVLKSHYIEDNVSGDSRSTGSDALEYYFQGLILLLR
SLRAALGTTFCSTTEDLIMKPLTIIDLMEYYVHLAYAWHHRNSKVLLLLVQPLLITFTNG
HTPYEVDMKNMKKLLTQIPEVAVQNNVGLHVSQERNITHLVPEDERWQIISVCLWQHISR
FMQHNLNVLSYNLDDDGCFAGEPHQKYFSWAPISASLDSHSSSLKELIGLVSLSLVKLLK
PTLSQVASYHVKQLASLLQHKMDNGLRVTTLVWLEESNKSQPGALNQHINQDNVKLDTIG
ERLEADMLWDACADPKIIYESFAKEKIDLSHSLDHKPSNGWGTINRGIGAADETEEIHHH
EVTLNSSSPNSEAGSPAKSVFRGGHSFLSAWQKDTTISKEVTPFLNPKEIYKRNGELLEA
LCLNSIDQSQAALASNRKGIIFFNWKDDMPFRDHSDYIWSLADWPPNGWAGSQSTPAPTC
VSPGVGLGSKKGAHLGLGGATVGVGSFARPGRDLTGGGAFGVPGYAGMGASGLGWETQED
FEELVDPPATVENANTRAFSSHPSRPFFLVGSSNTHIYLWEFGKDKTTATYGVLPAANVP
PPYALASISALQFDHCGHRFATAALDGTVCTWQLEVGGRSNIGPTESSLCFNSHASDVAY
VTSSGSIIAVAGYSSNSVNVVIWDTLAPPTTSRASILCHEGGARSLAVFDNDIGSGSVSP
LIVTGGKGGDVGLHDFRYIATGRSKRHRHSDKGEQVIKTSSNNDTHSENGTKFGEQNQNG
MLWYIPKAHSGSVTKISIIPNTSLFLTGSKDGDVKLWDAKKAKLVHHWPKLHERHTFLQP
STRGFGGVVQAAVTDIKVVSHGFLSCGGDSTVKLVQLKDHI
NT seq 7686 nt   +upstreamnt  +downstreamnt
atgccggacgcagacgcaccctccgcttcccaaacctctatatccgccgtgggccccacc
caccacctccctctccaaatcctcagatccgacccgacacctcctgccccgacccgatcc
gacccaccgggatccaccatcgactggctccccgactttctggaattttcatgggtcgcc
tacggagcctcatcgctactagtgatctcccacttcccctccccactctccgatacagaa
acactcatcggacccattttccggcaggtattcgagctctccggcgacccctcatcggcc
gtcgaagctgtttcttggtcccctgccatgccctcgattggcgagcttgctgccgcagct
gagaattgcgtttgggtgttctcgcatgactcggcgacgtccaaaggttctttttgttgg
agccagaatgcagtacttgtacagtcgacgaaggttaaggcaatcagatggacgggctca
ggggatggaattgtttccggtggagttgaggtggttttgtggaaaagaaatggcaggttt
tgggaaattgcttggaagtttaaagcagaattaccacaaagtatggtcaccgcaacttgg
tctctcgatggaccatttgcaactgcagcttatcagagtaaatggcagactgaaggattg
tcaactaataaggctagcaaatgtgtgttagtatgtcaaagtgatggaaaatctggattt
ttgaaatccgacctacatcatcctcatgctgtctcaatgattcaatggaggccatctacc
gataggcatttaaacagagatgcaagacatccaccaaggcaagtgttgctcacttgtagc
acagatggaactattaggttatggtgtgaggttaatgatggaaggggaagaaaatttggt
aaggacatgaatgaccccaaaacaatgagatgctctttttctgtagccgcagtaatagag
ataaaccaggctttgaatggacttctgggcactgatatatatgtgatgtgggctacagaa
attgggggtgtatgtaaaactcgtgaaggatctaaacaaattttctccacaaaaggttat
ctgcaggacctggctggtaattgcgagtggttgattgggtttggccctggaatgttggta
aatttctgggctatacactgtctcgacgatgtctcaccaatacgatttccgcgggttact
ttatggaagacacagaaactgcaaggtctgaaagtgggaaattctaattggactggactt
tctaactgtaaagatggaatacctcttaataaagttgttatctcaaggaactccttgtct
ggtccaccaacattatgctctttggttcagttattaccttgtaattccttggtttggtca
cgaatacatactcagacatcaaataatatagaggatacacccattaataaatctggtgca
gagaacatcatatcatgttcagctggtggactcctgaatttggatggtcatgctggaaga
atcttacaagtagatgtgcatccttatagctgtgaagttgagttggctgtctctttagat
tcttgtggattacttcttttttggttcttttctactatttcaaactgcatcttggaccgg
ccaacactaattccaacatgggagctttgtgggaagcttgcgactcaaggttcatgctcc
aaatatacaagcttgaggtgggcaccatcaattggaaatgaagcagttattcttcttatg
ggacatgctggagggattgattgctttgttgtaaaaattcatcacaatgaggaagaaagt
atagaatgtcactacttatgtacaataccttttacaggtcatggtccttatgtggatggt
cctgctagtatcttttcaattcctttgccttcaacttgtcctaaaaccctaaaatctaat
aaacttttgcttttgggtgtatggatgaatgggtttcaggctctttcttgggaaataacc
ttgcattcttttgatttatcaagaagctactgtgagtgcaattttgatgcaggaaatgcg
tctgaaggcagtatgtggggatttgaaactacttttgctgataaaagatattgtcttaat
gtaaaaccctgctcatcacagatcccagatcctcacacgcatgatgaggttacaagtttt
gctgtggtctacccaggtagaaagatctgtatggaaaagaatttggcttctattattgat
ctatgctatcctccatatattatggctacaggttgctccgatggtagtttgaaattgtgg
aggagtgtcatggataaaccatcaacgcctcacattccatgggaacttgtgggtaagttt
caggcacatcaaggacctattagccatgtatgcttatctgactgtggtcgtaagatagca
accctttggaaggagctttcttcaaatactgttagcactcttcatatatgggactctgta
ctcctagcaggtgcagggtcttttatgctagaacatacaatatcctttggtcaagatctt
gttgctttaaattggctatcatttggaaatggtcagttattacttggagtttgcacaaaa
aatcagttgcaagtatattcccagcagcgttgcggtggccagactttattaaactctgaa
aaatcattgaaaagggatatatgggtctgcattgcgtcgactcataccttccctctcatt
aatgatttcttttggggccccagagcatcagctgtatttgttcatagtagctacttttgt
gtaaatagtcagtggttattccttgcagataagaaacatcttgttaatgtcgatccaagt
tacatcatggaaaattgcttggattctgtgggtggaatggaagaggacattagttctgga
attttcattgattgtggacttggtcaattcagtaaaatattacttgataacaacagaaga
gattgcaagtctgatattccattggagattgatttgaaaaaggattatctttctagcagc
ttgtttgtagcaagggctcaactgaagtgtagtggggctactaaagtaagtatatggacc
atgcatgaagtggtcgagcagttaagtggatctctgccagtttatcacccagaggctctc
tttatgaatatctattcaggaaattggaagcgtgcttacattgctctgaggcatcttaat
gagtttctctcttctaattcttctcctgagaggaagtgtagccctgcaaagtctagcaat
tgcattccgcagattcctttgtcaaatttccttgatgcacatatctcaataaattcaaat
gacaaaggatttcagtggagtggtgatgcctctgtattttcttcatcttctccgtttcaa
agaggctttggccaatttacaaacagtttggactcttatggttccagtaatatgatcaat
tcttcctcaacaaaatctgaactcaatgactttattgagccttttgagaagttgtacaag
tcagcagatataagtgacatagagaagattcaaattcttgccattatagatcttcttact
gaattgtgtagttcaaactctagttctgcatatgaaagtcttgatgaacctggacggagg
ttttgggttggattgaggtttcagcaactacattttttccgaaagtctggtagatcagca
tccgtggaagagttggtaattgactccaagttgattggatgggcctaccactctgattgc
caggagaatttatttggttcgtttctacctaatgatccatcttggcaagaaatgcggaat
ttgggtgtaggattttggtttacaaatacagcacagttgtgttcaaggatggagaaactg
gcaagattgcagtatctgaaaaggaaagatcctaaagactgtgcattgctgtacattgca
ctgaatagaattcaagttttgtctggccttttcaaaataagcagggatgagaaggataag
ccccttgttggatttctttcacgcaattttcaggaggagaaaaataaggcagcggctttg
aagaatgcatatgtcttaatggggagacatcagctggaattagcagttgctttctttctg
cttggaggtgatacttcttctgcagtcaatatttgtgcaaagaaccttggggatgaacag
cttgcattagttatctgtcgactagctgagggtcgtggtgggccactagagagacactta
attacgaagttcatgctaccatccgcaattgagaagggcgactgttggttgggaagcctt
ttggagtgggagctgggaaattactctcaatcttttacatgcatgcttggtttccaaata
aattctgcaactgaaaagtatgcacttttgtccaacggtgctcctttttcagacccaaac
gttggtctgtattgtctaatgctagcaaccaataattgcatgaaaaatgctgttggggag
caaaatagtgcattaatcggaaggtgggcaatattgactacagctactgcattaaacaga
tgcggtcttccacttgaagctttggagtacctttcatcttcaccaaacattcctggggat
acagatgaaaggggtacatcagatcttgggcattctgaaaatctgcgtgcaattctaaat
ccttctcccagaaattctagcaattggttatcaagtaatgtggctctccatctggagttc
caagccaaatcagatttgacacttcaatacttatcaaagttggtaagagagcatccaagc
tgggtggatattgtctttggatcttttcaagctagtacatgtgtaaaggagtgcaaaaat
caggaatatgtaaaagttcttgaatctttccaacagaagttatacacaacactaaatcag
ttggagcagaagttttcagtggttcctttccatcttgttagcatgattttaatctcgctg
tatgattgtgggctgtggtttgttggatatgatatattacatagatacactgctcaaaat
caagatctagataaaatccaaacagctgacaaattcctatcatatgctcttatgcataag
ccgcttttgaaggccaccagagaaacttcccttttgttttcacgcgttattgttgcctgc
ggtataacatgctctgttctgaagtcgcattatattgaagacaatgtgtctggtgatagt
agatctacagggtctgatgctttggagtattactttcaaggtcttatactgttattgagg
agtttaagggctgctttgggaactaccttttgctccaccacggaagatctcataatgaaa
ccccttacaatcattgatttgatggagtattatgtacatcttgcatatgcttggcatcat
agaaactctaaagttctcttactattggtgcaaccccttctgatcacatttactaatggg
catacaccttatgaagttgatatgaagaatatgaagaaactcctcacccagattccagag
gtggcggttcaaaataatgtgggccttcatgtttctcaagagagaaatataacgcatttg
gttccagaagatgaaagatggcaaatcataagtgtttgcttatggcaacacatatccaga
ttcatgcaacataacttaaacgtattgtcgtataaccttgatgatgatggctgttttgct
ggtgaaccccatcaaaaatatttttcatgggcacctatctctgcaagtttagattctcat
agcagcagtctgaaagaactgattgggctggtctcattgagcttagtaaagttattgaag
cccacactttcacaggttgcctcttatcatgtaaaacagctagcatcacttctacagcac
aaaatggataatgggttgcgtgtaacaactcttgtttggttagaagaatctaacaagtct
caacctggagctctcaatcagcatataaatcaggataatgtcaaattggatacgataggt
gaaagacttgaagctgatatgttatgggatgcctgtgctgaccctaaaataatatacgaa
agttttgccaaggaaaaaatagacttgtctcactctcttgatcataaaccctctaatgga
tggggtaccataaacaggggcatcggggctgcagatgaaactgaggaaattcaccatcat
gaagttacactcaatagtagttctcccaacagtgaagctggatcacctgctaaaagtgta
tttcggggtgggcattctttccttagtgcctggcagaaagacacaaccatttcaaaggaa
gtcacaccttttctaaacccaaaggagatatataagagaaacggggagcttttggaggca
ttgtgtctcaactccattgaccagagtcaagctgcacttgcaagcaaccgaaaggggatt
atattttttaattggaaggatgatatgcctttcagagatcattcagattatatttggtca
ctggctgattggccaccaaatgggtgggctggttctcagtcaacccctgctccaacatgt
gtttctcctggtgttggtcttggaagcaagaaaggagcacaccttggattgggtggagca
actgttggtgtgggttcttttgcaaggccaggaagagatttgacgggtggtggagcattt
ggggttccaggttatgctggtatgggtgcatctggtttaggttgggaaactcaagaggac
tttgaggagcttgttgacccaccagctactgtggagaatgcaaatacgagggctttttcc
agtcacccatctagacctttcttcttggttgggtctagcaatacacacatctacttatgg
gagtttggtaaggacaaaactactgcaacttatggagtgctgcctgctgcaaatgtccct
ccaccttatgctcttgcatcgatatccgctttgcagtttgaccactgtggacacaggttt
gctactgcggccttagatggaactgtgtgcacgtggcagctggaggtcggaggaaggagt
aacattggtcctacggagtcatctctatgctttaacagccacgcatccgatgttgcttat
gtcacttcaagtggatcaatcattgctgtggctggatatagctccaatagtgttaatgtg
gttatatgggatacattggctccacctacaacctcacgagcttctattctttgtcatgaa
ggtggtgcacgctcgcttgcagtgtttgataatgacataggaagtggctctgtctccccc
cttattgtgactggtggtaaaggtggtgatgtcggacttcatgatttccggtacattgct
actggaaggagtaaaaggcataggcattcggataaaggtgaacaagtcatcaagacatca
tcgaataatgatacgcattctgaaaatggcaccaaatttggggaacaaaatcaaaatggg
atgctttggtatataccgaaggctcactcagggagtgtgaccaagatatccataatccca
aacacgagtttgttcttaactggaagcaaagatggagatgttaagctttgggacgccaag
aaagctaagttggtacatcactggccgaagttgcatgaaagacacacatttttgcaacca
agcactcgaggctttggcggagtagtccaggctgctgtcacagatataaaagtcgtttca
cacggttttctttcgtgcggtggagacagcactgtaaagttagttcaactcaaagaccac
atctga

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