KEGG   Malus domestica (apple): 103416368
Entry
103416368         CDS       T03194                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
mdm  Malus domestica (apple)
Pathway
mdm03082  ATP-dependent chromatin remodeling
mdm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103416368
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103416368
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mdm01009]
    103416368
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103416368
   03036 Chromosome and associated proteins [BR:mdm03036]
    103416368
Protein phosphatases and associated proteins [BR:mdm01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103416368
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     103416368
    SWI/SNF complex
     103416368
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    103416368
   PBAF complex
    103416368
   SWI/SNF complex
    103416368
SSDB
Motif
Pfam: SNF5 GP70
Other DBs
NCBI-GeneID: 103416368
NCBI-ProteinID: XP_008352844
LinkDB
Position
13:join(10185806..10185933,10186090..10186178,10186272..10186366,10186460..10186531,10186622..10186669,10186754..10186837,10186998..10187036,10187168..10187250,10187418..10187480,10188722..10188821)
AA seq 266 aa
MSAAPKSSKLKKSKNWCKEGEREEKAMKGQLSASSRGPVKFRMPTAQNLVPIRLDLDIDG
QRFKDCFTWNPSDPDSEIVVFAKRTAKDLKLPPGFITVIASAIQSQIVEFRSLEGQDMYT
GERIVPIKLDLRVNRTVIRDQFLWDLNNFESDPEEFAKTFCADLGIQDPEVGPAIAFSIR
EQLYEIVVQSVASVRETRINKKGRRGAEYTPVSKVGSTGLDLVKLFGHRSSVVRKRKEWD
VYEPIVDLLSTEEVEALQAKEERIAR
NT seq 801 nt   +upstreamnt  +downstreamnt
atgtcagccgctccgaaatccagtaaactgaagaaatcaaaaaattggtgcaaggaggga
gaaagagaagagaaagccatgaaaggccagctgtcggcttcctccagaggccctgtcaag
ttcagaatgccaacagctcagaatttggtaccaattcgcttggacctcgacatcgacggc
caaaggttcaaagactgcttcacttggaacccatctgaccctgactcggagattgtggtg
ttcgcgaaaaggacagcgaaagacttgaagcttcctccgggtttcatcacagtcattgct
tcggccattcagtcacaaattgttgaatttcgatcacttgaggggcaagacatgtacacc
ggcgagaggattgttccgattaagcttgatcttcgagtgaaccgcactgtcattagggac
cagtttttatgggacttgaacaactttgaaagtgatcctgaagagtttgctaaaactttc
tgcgcggacttaggtattcaagaccctgaagttgggcctgcaattgccttttcaattaga
gaacaactgtatgagattgtagttcaaagtgtagcttcagtaagagaaaccagaattaac
aagaagggacgccgtggagctgagtatactccagtcagtaaagtaggtagtactggattg
gacctggtgaagttatttggtcacagatctagtgttgttcggaaaagaaaggagtgggac
gtatatgaacccatcgttgatcttctatcaaccgaggaagtggaggcccttcaagcgaaa
gaagaaaggattgctcggtga

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