Malus domestica (apple): 103416768
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Entry
103416768 CDS
T03194
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Module
mdm_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103416768
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103416768
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
103416768
NCBI-ProteinID:
XP_008353213
UniProt:
A0A498HPW8
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Position
16:complement(join(12517813..12518040,12518173..12518398,12518621..12518910,12519021..12519341,12519483..12519701))
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AA seq
427 aa
AA seq
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MAIAGGMSCHAILVLCLAALASRATGRVAIPPAVFDVFRGSNLGVHDKADPDEKIFNVVD
FGAKPDGNHDASMNFIKTWLAACHNTGKSRVLIPPGTYKSGPVVFQGPCTSSKPVVVQVL
GTIKGLNDLSLYEEPYWFLFENVEGLVIIGNGIFDGQGSSAWKVAGDCGSSSDGCSPLPS
NIKFNGVRDGVIRGISSLNSKGVHLFITDSQNVRVRRVNISAPRTSPNTDGIHISNSNNV
KVARTHIATGDDCIGMIQGSTNIAINNVICGPGHGISVGSLGKYEHENDVTGITVKKTTF
LNTDNGIRIKSWPGSGPSRASGMVFKDIIMQNVRNPIIIDQEYCTGGCNKNQPSHVQISD
VHYINIRGTTPSNVAVDFICSSQVPCQNIQLHDIDLKYTGPNAAALTNVCKNVKAGFRGI
QNPPACH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccattgctggaggaatgtcttgccacgccattcttgtcttgtgcttagctgcattg
gcctctcgagccaccggcagggttgccattcccccggctgtgttcgatgttttccgtggt
agtaatttgggtgtccatgacaaagctgatcctgatgagaagatctttaacgtggtagat
ttcggcgccaagcctgatgggaaccacgatgcaagcatgaatttcataaaaacatggctt
gcagcatgccacaacactgggaaatcaagggttctgatcccaccggggacatacaagagt
gggccagtggtatttcaagggccatgcaccagttccaaacccgtagttgttcaagtttta
gggaccataaaaggcctgaatgatctgtccttatatgaagagccatactggttcttgttt
gagaatgtagaaggcttggtcattatcggcaatggcatctttgacggacaaggttcaagt
gcctggaaagtcgctggtgactgcggcagttccagcgatggttgcagtccactcccatct
aacatcaaattcaacggcgttagagacggggtcattcgaggcattagttccctcaatagc
aaaggagttcaccttttcatcactgacagccagaatgttagggttcgcagagtgaatatc
tctgcccctcgaacaagccccaacactgatggcatccacatcagcaactccaacaatgtc
aaggtcgccagaactcacattgccaccggtgatgattgcattggcatgattcagggatca
accaacattgccatcaacaatgtaatttgtggccccggacacggcattagtgttggtagc
cttggcaagtatgagcacgaaaatgacgtgacaggaatcaccgtgaagaagaccacattt
ttgaacacagacaatgggattagaatcaagtcatggccaggatcgggtcctagtcgggca
tcaggaatggttttcaaggacatcatcatgcagaatgttaggaaccctattataattgac
caagagtactgcactgggggatgcaacaagaaccagccatcgcacgtgcagatcagcgat
gtccactacataaacattagagggacaacaccgtcaaatgtggcagtagatttcatttgc
agcagccaggttccttgccaaaacattcagcttcacgacatcgatttgaagtatactggt
ccaaatgctgcagctctcaccaacgtatgtaaaaatgtaaaagctggttttcgtggcata
caaaacccaccagcctgccactga
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