Malus domestica (apple): 103417440
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Entry
103417440 CDS
T03194
Name
(RefSeq) KH domain-containing protein At5g56140
KO
K14945
protein quaking
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103417440
Spliceosome [BR:
mdm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103417440
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
103417440
NCBI-ProteinID:
XP_008353854
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All DBs
Position
03:join(3248607..3248743,3248917..3249002,3250521..3250666,3251485..3251604,3251681..3251797,3251993..3252136,3252255..3252404)
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AA seq
299 aa
AA seq
DB search
MEMTSSSGGGRYMAYSPSPSAPHSPHLSGLRSASSSAALVAAEKEKYLSELLGERHKLSP
FLPVLPHCNRLLNQEILRVTTLLGNASVLGQSGLEHASPLASRGMFPNGGADVNGWASRI
QSEMSGLLQPLSTQNWLSSQSSSSGLIVKRTIRVDIPVDKYPNFNFVGRLLGPRGNSLKR
VEATTECRVLIRGRGSIKDPTREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLLQAR
EVLEDLLRPVDESQDFYKKQQLRELAILNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgacgtcatcatcgggcggtggaaggtacatggcgtactcgccgtcaccgtcg
gcacctcactcccctcacctctccggccttcgctccgcctcctcctccgctgctctcgtt
gccgccgagaaagaaaaatatctatctgagctgcttggggagcgtcacaagctgagtcca
tttttgcctgtgctgccgcattgcaacaggttactaaaccaagaaatattgcgtgtaact
acactgttggggaatgcgtcagttttaggtcaaagtgggcttgaacatgctagccccctg
gcatctagaggaatgtttccaaatggaggtgctgatgtgaacggatgggcatcacggatt
caatcagaaatgtcaggtttattacagcctttatcaacccaaaactggctgagttctcag
agtagttcatctggtctgattgtgaagcgaacaatccgggtggatattccagttgacaaa
tatcctaattttaactttgttgggcggttgctaggccccaggggaaactctcttaagcgg
gtggaagcaactactgaatgtcgtgttctgatcaggggacgtggtagcataaaggatcca
actagggaagaaatgatgagaggaaaaccagggtatgaacatctgaacgaacctcttcat
attctagtggaggcagaactaccagttgaaattattgatgctcgtttattacaagcacgt
gaggtacttgaagatttgctcaggcctgtggacgaatctcaggatttctacaagaaacag
cagctgcgagagttggcaatcctcaatggcacacttcgtgaagagggttctccaatgtct
ggttcggtgtcacccttccacaacagtcttggtatgaagagggccaagaccagggggtaa
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