Malus domestica (apple): 103417877
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Entry
103417877 CDS
T03194
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
mdm
Malus domestica (apple)
Pathway
mdm04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
103417877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103417877
Transcription factors [BR:
mdm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103417877
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
103417877
NCBI-ProteinID:
XP_008354251
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All DBs
Position
01:join(30745685..30746170,30746551..30747198,30747874..30747939)
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AA seq
399 aa
AA seq
DB search
MAMDDRDRSSDFLEEHEQYYHGDTDCNLGTLGDDLFSMLESLDDHGFGGGGGGGIVDFPQ
PSATAPLEYEQLLAVFSASPKDFSSSADQTELDETNSAPKTKRLKFSSAATPTATATTTT
MNPSDQDGGRMSHTTVERNRRKQMNDHLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQ
QVLQSLEAKKQRKAYSCEVLSSPRLQQVSSPRPPGPSPSVLSPRKPPLSPRLGGSSLPPI
SPRTPQPTSPYKPTAARTILQQPQILPAAPNIFGNYLISSPTMVASSSLDPSPTSSSATS
SINNSIDNLNELFANSKSAIADVEVKFSGPNVLLKTVSPRIPGQALKIISTLEDLSLEIL
HVSITTADETMLNSFTIKIGIECQLSAEELVHQIQQTFC
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggccatggacgatcgcgaccgttcatctgattttctcgaagaacatgagcagtactac
cacggcgataccgattgtaacttaggcactctgggagacgatctttttagcatgttagag
agcttagatgatcatgggtttggaggaggaggaggcgggggaattgtggactttcctcag
ccgtcagctacagctccattggaatatgaacaactacttgctgtttttagcgcatcacca
aaagacttctcctcctcagctgatcagaccgagcttgatgaaactaactctgcccccaaa
accaagagactcaagttctcatcagctgccacccccaccgccactgccaccacaacaacc
atgaatccttcagatcaggatggagggcggatgtctcatacaacagtggagcgcaaccgt
agaaagcaaatgaacgaccacttgagtgtcttgcgctctcttatgccttgcttttatgtt
aaacgaggagatcaagcttcaattattggaggggtggttgattacatcaatgagctgcag
caagttcttcaatcacttgaagccaaaaagcaacgaaaagcatacagctgtgaagtgtta
agcagccctaggctgcagcaagtttccagtccaaggccacctggtccttcaccatcagtc
ctcagccctagaaagccacctctcagccctaggctcggcggcagcagcttaccacccatc
agcccaagaactccacaacccacaagcccttataagccaacggcagccaggacaatattg
caacaaccacaaatattacctgcagctcctaatatttttggtaattatctgatttctagt
ccaacaatggttgctagctcatcacttgatccatcccctacttcttcaagtgctacttcc
tccattaataatagtatcgacaatctcaacgagcttttcgccaactccaagtccgccatt
gcggatgtggaggtgaaattttcgggtccaaatgttcttttgaaaacagtgtctcctcgg
atacctggacaggctctaaaaatcatttccactcttgaagacctttcgctagaaattctc
catgtcagtatcaccaccgctgacgaaaccatgcttaattccttcaccatcaagattgga
attgaatgccaacttagtgccgaggaactcgttcaccaaatccagcaaacattctgctaa
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