Malus domestica (apple): 103418066
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Entry
103418066 CDS
T03194
Name
(RefSeq) zinc finger CCCH domain-containing protein 64 isoform X2
KO
K24939
CWF19-like protein 1
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103418066
Spliceosome [BR:
mdm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103418066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_10
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
103418066
NCBI-ProteinID:
XP_028944444
LinkDB
All DBs
Position
02:complement(join(6057322..6057450,6057546..6057691,6057812..6057905,6057981..6058266,6058372..6058817,6059027..6059144,6059292..6059411,6059560..6059689,6060193..6060469,6060556..6060630))
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AA seq
606 aa
AA seq
DB search
MAPPKILLSGDVSGNLKQLFKRVVSVNKSAAGPFDALLCVGQFFPDSADQLDEFNDYIEG
RAQIPLPTYFIGDYGVGAAKVLLAATRDAGNQGFKLDGLKICNSLYWLKGSGKFTLHGLS
VAYLSGQQSSDSQQFGTYNQDDVDVLRAIAEEPGIIDLFLTNKWPSGITNRANISDAPSG
VSEPFGTDNIVAELVAEIKPRYHIAGTKGVFYAREPYSNVDAVHVTRFLGLAPVGNKDKQ
KFIHALSPTPASTMSAIEIRAKSTTTTLSPYTYEEKTAHSIEAGKRSSDSISDSQYWRYD
VPQKRQKHGDGNRLCFKFVSSGSCPRGESCNFQHDVDAREQSLRGVCFDFMNKGKCERGP
ECKFKHSLQDEGDSNSQPGRGSGNANRNRSTECWFCLSSPKVESHLIISIGEHYYCALAK
GPLVEDHVLLIPIGHSPNTVSLPSECDIELDKFQNALKKYYNKQGKEVVFFEWASKRTTH
ANLQVVPVPSAKAAALKNIFNLAAERQGFKFTTMKSSNNYDGRTLLGEQFDRNFSFFYVQ
LPDGTILSHSIEENENFLPQFGRQVMAGLLKKADRDDWKNCTDSKEEETKMVEDFKSGFG
EFDPNK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggctccccccaaaattctgctctccggcgacgtttcaggcaacctaaagcagctcttc
aaacgcgtcgtttcggtcaacaaatcggcggcgggtccattcgacgcgctgctctgcgtg
ggccagttcttccccgactcggcggaccagctcgacgagttcaacgattacatcgaaggc
cgggcccaaattcctctcccgacctacttcatcggcgactacggcgtcggcgccgccaag
gtcctcctagctgcgacgagagacgccggcaaccaaggcttcaaattggacggcttgaag
atttgcaacagcctctactggttgaaaggcagtggcaagttcacgctccacgggttatct
gtggcatatttatctggtcagcaatcttcggatagccaacagtttgggacgtataatcag
gacgatgttgatgtattgcgagcgattgctgaggagccaggaattattgacttgttccta
actaataaatggccaagcgggatcactaatagagcaaatatatctgatgctccctctgga
gtttccgagccttttggcactgacaatattgtggcagagttagtagccgagatcaagcca
cgctatcatattgcaggcacgaaaggcgtgttctatgcacgtgaaccttactctaacgtt
gatgctgtgcatgtcacacgcttcttgggtcttgctccagtaggaaacaaagataagcag
aaattcattcatgcgctttctcctactccagcatctacaatgtctgctattgagattagg
gcgaagtcgacgaccactaccttatctccatacacatatgaggagaaaacagctcattca
atagaagctggaaagaggtctagcgatagtatttctgattcacagtactggagatacgat
gtcccacaaaaaaggcagaaacatggagatggtaataggctgtgttttaagtttgtatca
tctggatcttgtcctcgaggggaaagttgcaactttcaacatgacgtagatgcaagagaa
caatcgttgagaggtgtttgtttcgattttatgaacaaaggtaaatgtgaaaggggtcca
gagtgcaaatttaagcacagcttacaggatgaaggtgacagcaattctcaaccgggacgt
ggatctggaaatgctaacagaaacaggtcaacagagtgttggttttgtttgtcaagcccc
aaagtagaatcacatctcattatcagcataggggagcattactattgtgcccttgctaaa
ggcccgcttgttgaagatcacgtattgctaattcctataggtcattcaccaaataccgtt
tctctaccctcagaatgtgacattgagctcgataagtttcagaatgctctgaagaagtat
tataacaaacaaggaaaggaagttgttttctttgaatgggcttcgaaacgtacgactcat
gctaatcttcaggtcgttcctgttccttcagccaaagcagctgcccttaaaaatatattt
aacttagctgctgaaaggcaggggttcaagttcacaaccatgaaatccagtaacaattat
gatgggagaacattgttaggggaacagttcgacagaaattttagtttcttctatgttcag
ctccctgatggtacaatcctatcacattcgattgaagagaatgagaacttcttaccccaa
tttggacgccaggttatggcaggtttgttgaagaaggccgacagggatgattggaagaat
tgtacagatagcaaagaagaggaaaccaagatggtggaagatttcaagagtggatttgga
gaattcgatccaaataagtaa
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