KEGG   Malus domestica (apple): 103418084
Entry
103418084         CDS       T03194                                 
Name
(RefSeq) protein CTR9 homolog isoform X1
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103418084
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     103418084
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_19 TPR_12 TPR_8 TPR_16 TPR_14 TPR_17 TPR_6 TPR_CcmH_CycH TPR_11 TPR_7 TPR_9 ANAPC3 TPR_10 ARM_TT21_C ARM_TT21_N Fis1_TPR_C RPN7 TPR_Slam ARM_TT21_5th DUF7017 NatA_aux_su HAT_PRP39_C T7SS_EccA1_N
Other DBs
NCBI-GeneID: 103418084
NCBI-ProteinID: XP_008354456
LinkDB
Position
02:join(6727481..6727621,6727767..6727833,6727959..6728153,6728571..6728671,6729213..6729266,6729464..6729580,6729675..6729738,6729871..6730085,6730572..6730656,6730968..6731068,6731153..6731245,6731765..6731833,6731957..6732049,6732218..6732484,6732673..6732753,6732845..6733003,6733120..6733215,6733314..6733415,6733498..6733605,6733704..6733928,6734010..6734276,6734385..6734456,6734871..6735185,6735379..6735564)
AA seq 1090 aa
MACVYIPVQNSEEEVMVVLDQLPKEATDIIDILKAEQASLDLWLIIAREYFKQGKLDQFR
QILEEGSGAEIDEYYSDVRYERIAILNALGAYYTYLGKIETKQREKEEHFILATQFYNKA
SRIDIHEPSTWVGKGQLLLAKGEVDQAFSAFKIVLDGDRDNVPALLGQACVEFNRGHYSD
SLELYKRALQVHPDCPAAVRLGIGLCRYKMGQFDKARQAFERVLQLDPENVEALVALAIL
DLHANTAAGIRRGMEKMQRAFEIYPYCAMALNYLANHFFYTGQHFLVEQLTETALAVTNH
GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQLKMGDLRS
ALSNFEKVLEVYPDNSDTLKVLGHIYVQLGQTEKALEFMRKATKVDPNDSQAFLDLGELL
ISSDAGAALDCLKTAHNLLKKEGQEVPIEVLNNLGVLHFERGEFELAQQTFREALGDGIW
LAFIDGKENPPSIDANATISQYKDMGIFHHLEKEGHLVELPWDKVTALFNLARLLEQLHI
TETASILYRLILFKYPDYVDAYLRLAALAKARNNFQLSIELVNDALKVNNKCPNALLMLG
DLELKNDDWVKAKETLRAASEATEGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKS
KELYTKVLSQHSANLYAANGAGVVFAEKGHFDVSKDIFTQVQEAASGNIFVQMPDVWINL
AHVYFAQGNFALAVKMYQNCLRKFFNNTDSQILLYLARTHYEAEQWQDCKKSLLRAIHLA
PSNYTLRFDAGVVMQKFSASTLQKPKKSVDEVRSTVSELENAVRLFRQLSAASSLHIHGF
DEKKIDTHVEYCSHLLDAARVHFKAAEHEEQKIKHKQEVARQMALAEEARRKAEEQRKFQ
LERRMQEDELKRVRQQEEQFERVKEQWKSSTPGSKRRERSEMDDEEGGHSEKRRRKGGKR
RKKDKHSRSRYETEGAEAEMMDDQEEPEYEDANMNYREPMGQMNEQDEEENVQDHLAAAG
LEDSDADEEAALSTARRRRAFSESDDDEQPEHQPESSPVRENSAELQSDGEGREGGGDKL
DGDAALDDED
NT seq 3273 nt   +upstreamnt  +downstreamnt
atggcgtgcgtgtatataccggtgcagaattcggaggaggaggtgatggtggttctggat
cagctccctaaggaagctacagatatcatcgacatcctcaaggccgagcaagcatctctc
gatctctggctcattatcgcgagagagtatttcaaacaaggaaagcttgaccagttccgc
cagattttggaagaaggctccggtgctgaaattgatgaatattattctgatgttcgttat
gaaaggattgccatcttgaatgctttaggggcctactacacctaccttggaaaaattgag
acaaaacagagagaaaaggaggagcattttattttagcaacacaattctacaacaaagcg
tcgagaatcgacattcacgagccttctacttgggttgggaaaggtcagcttttactggct
aaaggtgaagtagatcaggcattttctgcattcaagattgtattagatggagaccgagat
aatgttcctgcccttttgggtcaggcatgcgttgaattcaatcgtgggcactattcagat
tcattggagctctacaagagggccctgcaagtacatcctgattgtcctgccgctgtaagg
cttggcataggtctctgtcgttacaaaatgggtcaatttgataaagctcggcaggccttt
gaacgggttctacagttagatccagaaaatgttgaggctcttgttgcacttgcaattctg
gatttgcatgcaaatacagccgctggaataaggagaggaatggaaaaaatgcaaagagct
tttgagatttacccttattgtgcaatggccttgaactatttggccaaccattttttctac
actggtcagcactttctggttgagcaattaacggaaactgcactggctgtgaccaaccat
ggaccgacaaagtcacattcctactacaacttggcgcgatcttaccatagcaagggtgac
tatgataaggctggagtctactacatggcatctgttaaggaaatcagtaaaccccatgag
ttcgtatttccttattatggtttgggacaagtacaactgaagatgggagatcttagaagt
gcactgtcgaactttgaaaaggttttggaggtttaccctgataatagtgacacattgaaa
gtccttgggcacatatatgttcagcttgggcagactgagaaggccttggaatttatgagg
aaggccacaaaagtggacccaaatgattcccaggcatttcttgacctgggggaactgttg
atttcatctgatgctggagctgctctggattgcctaaaaactgcacataatcttttgaaa
aaggaaggtcaagaagtaccaattgaagttcttaacaatcttggggttctccattttgag
aggggagaatttgagcttgctcaacaaactttcagggaggcactaggtgatggaatatgg
ctggccttcatagatggtaaagaaaaccccccatctattgatgcgaatgcgactatttca
cagtacaaggacatgggtatatttcatcatcttgaaaaagaaggtcacttagtcgaatta
ccttgggataaagtcacagcactatttaacctggccagattacttgagcagttacatatc
actgaaactgcaagcatactgtaccgtctcattttgtttaagtatccagactatgtagat
gcttatctgagactcgctgccctggccaaagctcgaaataactttcaactaagcattgaa
ctggttaatgatgctctgaaggtgaataacaagtgcccaaatgcattattaatgcttggt
gacttggaattgaaaaatgatgactgggttaaggcaaaagaaaccttgcgggctgctagt
gaagcaactgaagggaaggattcctatgccaccctatctctgggcaactggaactacttc
gcggcaattcgcaatgagaagagaaatcccaagttggaagctacacatctggaaaaatcc
aaagaactctacactaaagtcctatctcaacattctgctaatttgtatgctgccaatggt
gccggagtggtctttgcagagaaaggtcactttgatgtttcaaaagacatttttacgcag
gttcaagaagctgccagtggaaacatttttgttcagatgccagacgtgtggataaatttg
gcacatgtttattttgctcaaggcaattttgcattggctgtgaaaatgtatcaaaactgc
ttgagaaagttctttaataacacggactctcagattctactctatttggctcgtacccat
tatgaagctgagcagtggcaagactgcaaaaagagtctactgagagccattcatttggca
ccttcaaattacacgctgaggtttgatgcaggcgttgtaatgcaaaagttctcagcttca
acgttacaaaagccaaagaaatctgttgatgaggtgcgatcaacagtttcagagctagaa
aatgctgttcgtttatttagacagttgtctgctgcttccagccttcacatccatggattt
gatgagaaaaaaattgatacccatgttgagtattgtagtcacttgcttgatgctgcgaga
gttcacttcaaagcagctgagcatgaggagcagaagatcaagcacaaacaagaagttgct
cgtcaaatggcattggctgaggaggcccgtcgtaaggctgaagaacagaggaaattccag
ttggagaggagaatgcaagaggatgaactaaagcgagtgagacaacaggaggaacaattt
gaacgcgtaaaggagcaatggaagagcagtacacctggttccaagcgaagggaaaggtca
gaaatggatgatgaggagggtgggcatagtgaaaagagacggagaaagggtggaaagagg
agaaagaaggacaagcactcaagatcacgctatgaaacggagggagcagaagctgagatg
atggatgatcaggaagaaccggaatatgaagatgccaacatgaattacagggagcccatg
ggtcagatgaatgagcaggatgaagaagagaatgttcaagatcatcttgcagcagctggg
cttgaagattctgacgctgacgaggaggctgcactatccacggctcgacgaaggcgggca
ttttcagaatctgatgatgatgagcaaccagagcaccaacctgagtccagccctgtaaga
gaaaattctgccgagttacagagtgacggggaaggaagagaaggtggcggtgataaactg
gatggagacgccgctcttgacgatgaggattaa

DBGET integrated database retrieval system