KEGG   Malus domestica (apple): 103418090
Entry
103418090         CDS       T03194                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03440  Homologous recombination
mdm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103418090
   03460 Fanconi anemia pathway
    103418090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mdm03032]
    103418090
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103418090
Enzymes [BR:mdm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103418090
DNA replication proteins [BR:mdm03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    103418090
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     103418090
    Bloom's syndrome complex (BTR)
     103418090
   FA (Fanconi anemia) pathway
     103418090
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII Methyltransf_35
Other DBs
NCBI-GeneID: 103418090
NCBI-ProteinID: XP_008354462
LinkDB
Position
02:complement(join(7209605..7210061,7210201..7210307,7210398..7210522,7210632..7210723,7210832..7210965,7211059..7211124,7211207..7211299,7211395..7211544,7211677..7211680,7211875..7211971,7212076..7212228,7212347..7212435,7212592..7212675,7213015..7213049,7213161..7213301,7213426..7213509,7213605..7213612,7213743..7213853,7213993..7214146))
AA seq 727 aa
MKKSPLPLQNASGSSKNRSLEKEALVKLLRWHFGHPEFRGKQLEAIEAVLSGRDCFCLMP
TGGGKSMCYQIPALAKKTGIVLVVCPLIALMENQVMALKEKGISAEYLSSTQTTQTKTKI
HEDLDSGKPSLRLLYVTPELIATSGFMTKLTKIHTRGLLNLIAIDEAHCISSWGHDFRPS
YRKLSSLRSHLPGVPILALTATAVPKVQMDVIESLCLHNPLTLRSSFNRPNIHYEVRYKD
LLDDVYADLSGVLKSSGDVCAIVYCLERTMCDELSAHLSQSGISCAAYHAGLNDKLRSSV
LDNWISSKIQVVVATVAFGMGIDRRDVRIVCHFNIPKSMESFYQESGRAGRDQQLSRSLL
YYGIDDCKKMKFILSNADNKKSKASNSREELSKKTLTDFQQMVEYCEGSGCRRKKILETF
GEQVPASLCKKTCDACKHPNLVSKYLEELTTTCVARQKFGSSRIFMSSSSDVINEDQTSE
FWNRDDEECSEEDISDSDDGLAAKNLSRSKLPAKLGFNEKIECLQRLEERYYKDKSSDTQ
MNKPDKNAISDTLRKASKQRLQTALKQGQQRLGNLAIEVEKSASFLENECYNKYKKTGKS
FYYSQVASTVRWLSTADSTALTNRLGTINCSPADNALPETEPPATTSPLVDGPTEAPSGD
SHNSVRSEHSVAVSPTESASPSITLPSIPSFSEFINTRKAKDLSSSASEKQSPNGVKEKG
LKKMRLH
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgaagaaatcgccattgccgttgcagaatgcaagcggcagtagcaagaatcggagtttg
gagaaggaagctctggtgaagctgctgaggtggcattttgggcatcctgaattcagaggg
aagcaattggaagccattgaagctgttctatcagggagagattgcttttgtcttatgccc
actggtggcgggaaatccatgtgttatcagataccggctctcgccaaaaaaactggaatc
gtgcttgttgtctgtcctttaatagccttgatggaaaaccaagtgatggcattgaaggag
aaaggaatttctgcagagtatctctcctcgactcagacaacccaaaccaaaactaagatt
catgaagaccttgactctggaaaaccatctctgaggctgctttatgtgacccccgaattg
atagcaacatctggatttatgacgaagctgacaaagattcacacgagagggttgttgaat
ctcattgccatagatgaggcacattgcatctcttcatggggccacgatttcaggcctagc
taccgtaagctgtcatctctaaggagccacctcccaggtgtaccaatattggctctaaca
gctacagccgttcctaaagttcagatggatgtgatagagtccttatgccttcataatcca
ttaaccctaagatcttctttcaatcgtcctaatatacattatgaagttcgatacaaagat
cttttagatgatgtctatgctgatctgtctggtgtgctaaaatctagcggagatgtttgt
gcaattgtttattgccttgaacgtacaatgtgtgacgagttgtctgctcatctatcacag
agtggaatttcatgtgctgcttatcatgcagggttgaatgataagttacgaagttctgtc
ctagataattggatttcctctaagatacaagttgtcgtggcgacggtggcttttgggatg
ggcatagatagaagagatgtcagaattgtttgtcattttaatattcccaagtcaatggaa
tccttctaccaagagtcgggtagagctggtcgtgatcaacaactctccagaagccttttg
tactatggaattgatgattgcaaaaaaatgaaatttattctaagcaatgctgataacaag
aagtcaaaggcctcaaactcgcgggaagagttgtcaaagaaaactctgaccgacttccag
cagatggtcgagtattgtgagggttctggatgtcgtagaaaaaagattcttgagactttt
ggtgaacaggtacctgcatcactatgtaagaaaacttgtgatgcctgtaaacatccaaac
ctagtgtccaagtatttagaggagctcacaactacttgtgtcgcccggcaaaaatttggt
tcatctcgaatttttatgagcagctcctcagatgtgataaatgaagatcaaacctctgaa
ttctggaatcgcgatgatgaagaatgttctgaggaggacatatctgattccgatgatggt
cttgctgccaagaacctttccaggtcaaagttgccagcaaagttgggattcaatgaaaag
attgagtgcttgcagcgtttagaagaaagatattacaaggataaatcttctgatacgcag
atgaataaacccgacaagaatgctatatctgatacgctgaggaaagcaagcaagcaaaga
ttacaaactgctctcaagcaaggtcagcagcggcttgggaacttagcgattgaagtggaa
aaatcggcctctttcctcgaaaatgagtgttacaacaagtataagaaaactgggaaatca
ttctattattctcaagtggcaagtacggtgcggtggttatcaactgcagattcaactgcc
ttaactaatcgccttggaaccattaactgttccccagcggataatgctctccccgaaaca
gaacctcctgcaacaacatcacctttggtggatggaccaacagaagctcccagcggtgac
tcccacaacagtgttagatcagaacattctgtagctgtgtcaccaacggaaagtgcttcc
ccaagtataactcttccatcaattccatccttctcagagttcatcaacaccagaaaggca
aaagacctcagctcaagcgcgtcggaaaagcagtcaccaaacggagttaaagagaaaggg
ttgaagaaaatgcgattgcattag

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