Malus domestica (apple): 103418313
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Entry
103418313 CDS
T03194
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00900
Terpenoid backbone biosynthesis
mdm01100
Metabolic pathways
mdm01110
Biosynthesis of secondary metabolites
Module
mdm_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103418313
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mdm01006
]
103418313
Enzymes [BR:
mdm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
103418313
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
103418313
2.5.1.29 geranylgeranyl diphosphate synthase
103418313
Prenyltransferases [BR:
mdm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
103418313
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
103418313
NCBI-ProteinID:
XP_008354667
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All DBs
Position
02:12381258..12382382
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AA seq
374 aa
AA seq
DB search
MSCMHLSSWVQFQTCSMLNQAGRSRSSQSFHLLHPLKTTIPISSAAPHRRRPTSPFAVSA
VLTKQETLTEEFDEESRKPTFNFKSYMLQRAESVNQALDAAVSLRDPITIHEAMRYSLLA
GGKRVRPVLCLAACELVGGSESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNH
KVFGEDVAVLAGDALLAFAFEHISLSTVGVSPARIVRAVGELAKSIGSEGLVAGQVVDID
SEGLSDVGLEQLEYIHLHKTAALLECSVVLGSILGGGSDSEIEKLRTFARYIGLLFQVVD
DILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKDAKEQLAGFDPEKAA
PLIALANYIAYRQN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcatgcatctgagctcatgggtccaattccagacctgctcaatgttgaatcaa
gcaggcagatccagatcttcccaatccttccacctcctccaccccctcaaaaccaccata
cccatatcctccgccgccccacaccgccgtcgacccacctcccctttcgccgtctccgcc
gtcctcaccaagcaagagaccctcacagaggaattcgacgaagagtcccggaaacccacc
ttcaatttcaagtcctacatgctccagagggcggaatccgtcaaccaggccttggacgcc
gccgtctccctccgtgacccgattacgatccacgaggcgatgcggtattcgcttctggcc
ggcggcaagcgggtccgaccagtcctctgcctcgccgcgtgcgagctcgttggtgggtcg
gaatccatggccatgccggcggcctgcgccgtcgagatgatccataccatgtcgctgatc
cacgacgacttgccatgtatggacaacgacgacctccgccgcggaaaacccaccaaccat
aaggtgttcggcgaggacgtcgcggtcctggccggcgacgctctcttggccttcgcattc
gagcacatctccctgtctaccgtcggcgtgtcgccggcccgaatcgtcagggcagtcggg
gaattggccaagtcaattgggtccgaaggactcgtggccgggcaagtggtggatatagac
tcagaggggttgtccgatgtgggactcgaacagctggaatacatccacctccacaagacg
gcggcgctgctggagtgctcggtggttctggggtcgattctgggaggtgggtcggattcc
gaaatcgaaaagctgaggactttcgctcggtacattggattgttgtttcaggtcgtcgat
gacatcctcgacgtgaccaaatcttcccaggaattggggaagacggcagggaaggacttg
gtggcggataaggtgacttatccgaagctgttggggatcgagaagtcgagagagtttgca
gagaaactgaacaaagacgccaaggaacaactcgccggtttcgatcccgaaaaggctgcc
cctttgattgctctggcgaactacattgcttacaggcaaaactaa
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