Malus domestica (apple): 103418492
Help
Entry
103418492 CDS
T03194
Name
(RefSeq) vacuolar protein sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
mdm
Malus domestica (apple)
Pathway
mdm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103418492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103418492
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdm04147
]
103418492
Membrane trafficking [BR:
mdm04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
103418492
Exosome [BR:
mdm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103418492
Exosomal proteins of colorectal cancer cells
103418492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
103418492
NCBI-ProteinID:
XP_028950874
LinkDB
All DBs
Position
02:complement(join(31931418..31931475,31932559..31932643,31932765..31932900,31933687..31933756,31933939..31933996,31934118..31934211,31934863..31935051,31935232..31935876))
Genome browser
AA seq
444 aa
AA seq
DB search
MAGNCLQAVELTTSGRPVLLPTEIECSLLSAVDLECEDLPNFPHLKSGLLILTTHRLLWL
PDSTTTIPTASSSASAIPLAAVTHIFAAKKSIKSMFHSPRLRFQLSVSPEGRVPDSGLGS
RSVVVTVVVRGKGDLDAFLSKFWESWRGRAWEIGDEQGSSDAVSGSGSASSSGLYTREGT
VRMVGVSGILRKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLLSGSQPND
EELGSKQEMQDWMLSVGIISPVTKESAGAQYHQQLSRQLADFVRLPLERAGGMMNLIDIY
CLFNRARGTELISPEDLLQACSLWEKFDVPVMLRKFDSGVMVIQNKSHSDEEVFARIKNL
VTKPDALRNGISASDAAITLGIAPGMAKEHLLTAESKGLLCRDISPDGFRFYINLFPEID
PNDLYLVKDYGIYHTWLRAASASG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaattgcctgcaagcggtggagcttactacgagcggccgcccagtcctcctc
ccaactgagatcgaatgttccctcctctccgccgtagacctcgaatgcgaagacctcccc
aacttccctcacctcaaatcgggtctcctcattctcaccacccaccgcctcttatggctt
cccgactccaccaccacaatacccaccgcctcttcttcagcctccgccatccctctcgcc
gccgtcacccacatctttgccgccaaaaagtcaatcaagtcgatgttccactcgccccgg
ctcagattccagctctcggtttcgccggaaggccgggttccggattccggtttgggttcg
aggtcggtggttgtgacggtggtggtgagggggaagggcgatttggacgcgtttttgagc
aaattttgggagagctggcggggtagagcctgggagattggggatgagcagggcagctcc
gatgctgtttcgggttcgggttcagcgtccagttccgggttgtatacgagggaagggacg
gtgaggatggttggagtttcggggatattgaggaaagagcaggagatgtgggagagtact
gataagagcttgcaggacgctttccaggacttgaatgctctcatgagtaaggctaaagag
atggtgatgctagcagaaaaaatgaggcagaagcttttatccggctcgcagccaaatgat
gaggaattgggttccaaacaagagatgcaagattggatgctcagtgttggtattatatcg
cccgttactaaggagtctgcgggtgctcagtatcaccaacaattgtcccgtcagttagca
gattttgtcagacttccacttgagagagctggagggatgatgaatcttatagacatctac
tgtctcttcaatcgtgctcgaggcacagaactgatatcgccagaggatttgctgcaagca
tgttctctctgggagaagtttgacgtcccagtaatgcttcgaaagtttgatagtggagtc
atggttatccagaataagtcccacagtgacgaagaggtttttgctagaatcaagaacctt
gtaacaaagcctgatgctcttcgaaatgggataagtgctagtgatgctgcaattacatta
ggtattgcaccaggcatggccaaggagcatcttcttactgctgaaagcaaaggtttgctg
tgcagagatataagccctgatggctttcgcttttatatcaacctgtttcccgaaatcgat
ccaaatgacttgtacctagtgaaagactatggaatctatcacacatggttgagggcggcg
tctgcttctggatga
DBGET
integrated database retrieval system
