Malus domestica (apple): 103418929
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Entry
103418929 CDS
T03194
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
mdm
Malus domestica (apple)
Pathway
mdm03020
RNA polymerase
mdm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103418929
09124 Replication and repair
03420 Nucleotide excision repair
103418929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103418929
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103418929
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103418929
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103418929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Tup_N
Motif
Other DBs
NCBI-GeneID:
103418929
NCBI-ProteinID:
XP_008355272
UniProt:
A0A498K1E8
LinkDB
All DBs
Position
05:complement(join(15094450..15094482,15095025..15095120,15095293..15095371,15095498..15095587,15095670..15095722))
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AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDENVLFAG
YKLPHPLQYKIIVRIHTSSQSSPMQAYNQAINDLDKEFDHLKNGFEAEVAKHSVEY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccccagaccgatatgaacggtttgtcgttccggagggaacaaaaaaggtgtcg
tatgagagggacacgaaaatcataaatgcagcatcatttacaattgagagagaggaccac
accattggcaacatcctccgcatgcagctacacagggacgagaatgttttgtttgccggc
tacaagcttcctcacccccttcagtacaagattattgtcaggattcacacaagcagccag
tcttcaccaatgcaggcatacaaccaggctattaatgatcttgacaaggaatttgaccat
ttgaagaacggttttgaggctgaagttgcaaagcattcagtggagtactag
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