Malus domestica (apple): 103418935
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Entry
103418935 CDS
T03194
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic isoform X1
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00730
Thiamine metabolism
mdm01100
Metabolic pathways
mdm01240
Biosynthesis of cofactors
Module
mdm_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
103418935
Enzymes [BR:
mdm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
103418935
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
103418935
NCBI-ProteinID:
XP_028955499
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Position
03:complement(join(6274807..6276326,6276516..6276643,6276786..6277098,6277859..6277964))
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AA seq
688 aa
AA seq
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MLQRNPGQVLRLSLKFSVVREQDKTVRSLLLLPAPDMASVHSALTSVVCKNGSHSSAAKF
PTTTFLPGFDAVGRLSSPFKKEVCLSSPSSGAKATLTFDPPATNSEKPKLPRHTVDPASP
DFLPLPSFEQCFPKSTKEHMEVVHEETGHVLKVPFRRVHLAGDEPPFDNYDTSGPQNISP
RVGLPELRKDWIERRDKLGAPRYTQMYYAKQGIITEEMLYCATREKLDPEFVRSEVARGR
AIIPSNKKHLELEPMIVGRKFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLS
TGRHIHETREWILRNSPVPVGTVPIYQALEKVDGIAENLNWEVFRETLIEQAEQGVDYFT
IHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDDILDICNQYDVALS
IGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDVQVMNEGPGHVPMHKIPENMKKQL
EWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVK
AGVIAYKIAAHAADLAKGHPYAQAWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLP
ADGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAEEAVIRGMDAMSAEFLAAKKTV
SGEQHGDVGGEIYLPESYVKAAERSTER
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgctacaacgtaatcctgggcaggtgctcagattgtctttgaaattttccgtagtgaga
gaacaagataagactgtgagaagcctccttcttctaccagccccagatatggcatcggtg
catagtgccctgacatcggttgtatgcaagaatggcagtcattcttctgcagcaaagttc
ccgacgactaccttcttgcccgggtttgatgcagttgggcgtctttcaagtccgtttaag
aaggaagtgtgccttagttccccgagctcaggtgctaaagctacactaacctttgatccc
ccagcaaccaattctgagaaacccaaactaccaaggcatacagttgatcccgcttctcca
gattttctgcctcttccatctttcgaacaatgttttcccaagagcacaaaagaacacatg
gaagttgttcatgaagaaactggtcatgtgctaaaagttccctttcgacgagtccacctg
gctggggatgaacctccatttgacaactatgataccagtggtccacaaaacattagcccg
cgtgttggactccctgaactgcggaaagattggattgagaggcgagacaaattaggtgca
ccaagatacactcagatgtactatgctaagcagggaattataactgaggagatgttgtac
tgtgccactcgtgagaagcttgatccagagtttgtgagatcagaagtagctcgtgggcgg
gcaattatcccttccaataagaaacacttggagctggagccaatgattgtcggaagaaaa
tttttggtcaaagttaatgcaaacattggaaattctgctgttgccagctctatcgaagag
gaagtttacaaggtccaatgggcaactatgtggggtgctgacactgttatggacctctct
acaggacgccacatccatgagacccgtgaatggatcctgcgtaactctcctgtgccagta
gggaccgtacccatttatcaagcgcttgaaaaagtggacggaattgcagaaaaccttaac
tgggaagtgttcagagaaactcttattgaacaagccgagcagggtgtagattacttcacc
atccatgctggggttctactacggtacatcccactaacagcaaagcgtatgactggtatt
gtttcacgaggaggatccattcatgcaaagtggtgcttagcttatcacaaagagaatttc
gcttatgagcactgggatgacatacttgacatctgcaatcaatatgatgtggccctgtca
attggtgacgggctgagacctggttccatttatgatgccaacgacactgcacagttcgca
gaactcttaactcagggcgaactgacccgtagggcatgggaaaaggatgttcaggtcatg
aatgaaggacctggacatgttccaatgcataaaattcctgaaaacatgaaaaaacagctc
gaatggtgtaacgaagcgcctttctacactcttggtcctctaacaactgatattgctcca
ggatatgatcacatcacctctgccattggtgctgccaacattggggctctaggcactgcc
cttctctgttatgtaaccccaaaagagcaccttgggttgccaaaccgtgatgatgtgaag
gctggagttatagcatataagatagctgctcatgccgctgatctagccaaaggtcaccca
tatgctcaagcatgggatgatgcactgagcaaggcaagatttgagttccggtggatggac
cagttcgccttgtcactagaccctatgactgccatgtcattccatgatgaaactctgccg
gctgatggtgccaaggtggcccatttttgctccatgtgcggtccaaagttctgttctatg
aagataacggaggatgtgaggaagtacgctgaagagcatggttacgggagtgctgaggaa
gctgtgattcgtggaatggatgctatgagtgctgagtttcttgctgccaagaaaactgtc
agtggagaacaacatggtgacgttggaggggaaatttacttgccagaaagttatgtgaaa
gccgcagagaggtccacagagaggtga
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