KEGG   Malus domestica (apple): 103419155
Entry
103419155         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein
  KO
K11797  PH-interacting protein
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103419155
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103419155
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SCAP WDR55 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Bromodomain Beta-prop_DCAF4 Beta-prop_EIPR1 WDR90_beta-prop_4th VPS8_N Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 103419155
NCBI-ProteinID: XP_070674649
LinkDB
Position
03:join(37489587..37489939,37490495..37490649,37491345..37491584,37492078..37492187,37492352..37492429,37492511..37492617,37492699..37492793,37492866..37492996,37493127..37493230,37493993..37494070,37494191..37494269,37494390..37494558,37494784..37494854,37495050..37495130,37495234..37495304,37495584..37495680,37495785..37495844,37495988..37496042,37496136..37496530,37496615..37497366,37497457..37498237,37498341..37498919,37499066..37499124,37499281..37499473)
AA seq 1630 aa
MDPRKCTLSGGATSFAMAPPSILNRLNEKAQFGKEERDTGHVVEAGVDIDIREVYFLIMH
FLSLGPCQRTFEQFGNDLLEHQLLPRRFHAWFSRSGIGSDNNEDATSFPLSYSNLVERYP
HIERDHLVKLLRQLLLSIATPLHGKVGRSTLNAADVPTLLGTDSFSLLDSDRNKENERVK
PLPAHLRWPYMQADQIHGLSLREIGGGFAKHHRAPSIRSACYAIAKPSTMVQKMNNKKKL
RGHRNAVYCAIFDRSGRYVITGADDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNAL
VASASNDFSIRVWRLPDGFPISVLQGHTGAVTAIAFSPRLSAVYQLLSSSDDGTCRIWDA
RSSQCPLRIYMPKPSETSTGKSNAITITGSSSSNGPQSHQILCCAYNANGTVFVTGSSDT
FARVWNALKSNTDNSEQPIHEMDVLAGHENDVNYVQFSGCVIPSKSSFSDSVKEETNGKF
KNSWFCHNNIVTCSRDGSAIIWVPRSHKFHGKVGRWTRAYHLKVPPPPLPPQPPRGGPRQ
RFLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTASSYVLDVHPFN
PRIAMSAGYDGQTIVWDIWEGVPIKIYELGHVKLVDGKFSADGTSIVLSDDVGQIYLINT
GEGESQKDAEYDQFFLGDYRPLARDEFGYLIDQETQLSTYRRNLQDPLCDSSMIPYPEPY
QSTYQQRRLGALGMEWRPSSMKFSVGVDINTGQEYMMPPLPDLERMIEPLPDFIDAMLWE
PENEVVSEDTDSEYNVTDENSSEGEKGNISTSSSSDPDCSEEDSEAGCSHKDGLRRSRRK
RPRVESSERRVKKRRVGEHDRIISGIKRTKNSKGGQKVSKRKSSKAKTLRPQRVAARNAR
TVFSQNPGTSTEGEDDWEDDSSNSESLQQEFHTQSDDGDFQIMQQNHTKEEPSRHGFINI
AKPRVVCSSQSNVRSMPKLVFKIKKQEAPRDVKLKDNNQADLVSPSSRYQDITPDNRIIN
SSVDPDSSSVDVVDLKFSRNLIANDLTDTGETVKTENSLEASTSYQDSRVRLEAATGSLA
SFNVHIEEMNNVHRDEEHTGTRAFEDLDGLKSRELSHTEEALVSSSFDSPALGEHKQKGI
EGSPEIEEFARRKHSGDYASLKFPAQNSTSSRDLIPNDSSSMDPNSNFGVRKVGGGAGRS
TSLKFVCKHRTNSEGSGGNVKEYATNINDHHDSGMDLPAAATNAIRGTRTFKIKATSRKV
DSVSCSPKLRWGHQTLGTSKDAEDSCSKLCDQIHQRPKSTRSHQGSCNDYGQSSSTRSML
VNPAGKLPWLMLSKHEDGYRYIPQLGDEVVYLRQGHQEYLKLVKNSEEGPWGPWESIKEN
IKVAEICKVESLVYASLPGSGESCCKIKLRFVDPSSAILGKALKLTLPEIDFNDFIVEKT
WYDASIGRNWTTGEECAVWWRDSISDEGGTWWVGRIVRCQAKSHEFPDSPWLRYEVRYEN
DDETHLHCPWELRGPSIVDDPSSCEQPHIDSESKEKLLCIFSNLQQKDLQTIQQLNQAVQ
KADFCNSFPVQLFPELIQSRLENDYYRSLEAVKHDIMVMMSNAQHYFKRNELQARIKHIS
KRFKKKLSKL
NT seq 4893 nt   +upstreamnt  +downstreamnt
atggatcctcggaagtgtactttgtctggtggtgcaacttcttttgctatggcacctcca
agcattttgaataggttaaatgagaaggctcagtttgggaaagaagagagggatacaggt
catgttgtcgaggctggagtcgatatagacattagagaggtttattttttgattatgcat
tttctgtctcttgggccatgccagaggactttcgaacagtttgggaatgatcttctggaa
catcagcttctacctagaaggtttcatgcttggttttcaaggagcggaataggaagtgac
aataatgaggatgctacctctttcccattgagttacagcaacttggttgaaaggtatcct
catatagagagagatcacttggtaaagcttctaaggcaactgctactgagtatagccact
cctttacatggcaaggttggaagaagtactctgaatgcagctgatgtccctacattactg
ggaactgattccttctcgcttctggatagtgataggaataaggaaaatgagagagttaag
cccctgccagctcacctgcgttggccttacatgcaggctgatcaaattcatggccttagt
ttaagggaaattggaggaggttttgcaaagcatcatcgagctccatccattcgctctgca
tgttatgcgattgctaaaccatcaactatggtgcagaagatgaacaacaaaaagaagcta
cgggggcaccgtaatgctgtctactgtgccatttttgatcggtccgggagatatgttatc
acgggtgcagatgatcggcttgtgaagatatggtcaatggaaactgcactttgcttggct
agctgtcgtggacatgaaggagacattactgacttggctgtaagttcgaacaatgctttg
gtggcatctgcttcaaatgacttttccattcgagtttggcgtttgccagatggatttcca
atttcagttcttcaggggcatactggggctgtgactgctattgcttttagtcccaggctt
agtgctgtttaccaacttctatcgtcatcagatgatgggacttgtcgaatctgggatgct
aggtcctcccaatgcccgctgcgaatatacatgccaaaaccttcagagacttcaactggg
aagagcaatgctattacaatcactggatcctcctcgagcaatggtccacagagccatcaa
atactttgttgtgcttacaatgccaatgggactgtttttgtcactggtagctctgacact
tttgcaagggtctggaatgctttaaaatctaatactgataactcagaacaaccaatacat
gagatggatgtactggcgggccatgagaatgacgtgaattatgtccaattcagtggttgt
gtcattccttcaaagtcttcattttctgactcggtcaaggaggagactaatgggaagttc
aaaaattcctggttttgtcacaacaacatagttacctgctctcgtgatggcagtgccatt
atatgggttccaagatcacataaattccatggaaaagttggacgttggacacgtgcatat
catctaaaagttccacctcccccactgcctcctcagcctcctcgaggaggcccacgtcaa
agatttcttcccacccctcgtggtgttaacatgattgtgtggagcctggataaccgcttt
gtgcttgcagctatcatggattgcagaatttgtgtttggaatgctgttgatggtagctta
gtacattctttaactggtcacactgcatcgtcttatgttttggatgttcatcccttcaat
cctcgaattgctatgagtgctgggtatgatgggcaaacaatagtttgggatatatgggag
ggcgtgcctattaagatatatgaacttggacacgtaaagttggttgatgggaagttttcg
gcggatggtacatcaatagtactttcagacgatgttggccaaatatatttaataaacaca
ggtgaaggtgagtctcaaaaagatgctgaatatgatcagttcttccttggggattatcgc
ccccttgcacgggatgagtttggatatcttattgatcaggagacacaactttccacttac
cggaggaatcttcaagatcctctatgtgattcaagtatgataccataccccgaaccttat
cagagtacataccagcaacgaagacttggtgctctgggcatggaatggcgtccatcatcc
atgaaattttctgttggtgtggatatcaatacaggccaagaatatatgatgcctcctttg
ccagatttggagagaatgatcgaaccactaccagattttattgatgccatgttatgggaa
ccagaaaatgaggttgtaagtgaagatactgattcggagtataatgttactgatgaaaat
tccagtgaaggggagaaaggaaatattagcaccagttcttctagtgatccagactgcagc
gaagaagacagtgaagctggatgcagtcataaggatggccttcgtcgatcaaggagaaaa
agaccaagggttgagtcttctgagaggcgtgtcaagaaaaggagagtgggtgagcatgat
cgcattatatctgggattaaaagaactaaaaattcaaaaggtggccagaaagtttcaaag
aggaagtcttctaaagcaaagacattgagaccccagcgagtagcagcacgcaatgctcga
actgtgttttctcagaaccctggaacatctacagaaggagaagatgattgggaagatgat
tcatctaatagtgagtctcttcagcaagaattccacactcaaagtgatgatggggacttc
cagataatgcaacaaaaccatactaaagaagaaccatctcgacatgggtttatcaatata
gcgaagccacgtgtagtttgttcgtctcagtcaaacgtcagaagcatgccgaaattggtt
tttaagattaagaagcaagaggctccaagggatgtaaaactcaaagataataatcaggct
gatttggtgtctccatcttctagatatcaagatatcactccagataacaggattattaac
agctctgtggatccagattcctcttcggtggatgtggttgacctaaagttttcaagaaat
ctcatagccaatgatttgacagatactggggaaactgtaaagacagagaattctttggaa
gcatccacaagttaccaggatagcagagtcagattggaagcagctactgggtcgcttgct
agttttaatgtccatatagaagagatgaataatgtccatcgggatgaggaacatactgga
acacgtgcatttgaggatctggatggtctcaaaagtagagagctttctcatactgaagag
gcccttgtatcttcatcatttgattcccccgctttgggcgagcacaaacaaaaaggaatt
gagggttctccggagatagaggagtttgctagaagaaagcactctggtgattatgcttct
cttaaatttcctgcacaaaactccacaagttctagagatttaatccccaacgattcttca
agcatggatccaaattcaaattttggggtacggaaagtgggtggaggtgctggcagatca
acttctttgaagtttgtttgcaagcacaggactaattcagaaggttctggtggtaatgtc
aaagaatatgcaacaaatatcaacgaccatcatgattcaggaatggatctccccgctgct
gcaaccaatgctatacgcggaacaagaacctttaagatcaaagcaacttcacggaaggtg
gactctgtgagctgtagccctaagttgagatggggccatcaaacattggggacatcaaag
gatgcagaagactcctgttctaaattgtgtgaccagattcatcaaagaccaaagtctacg
agaagtcatcagggttcatgtaatgactatggccaaagttcttcaacccgaagcatgtta
gttaaccccgctggaaagttgccatggttgatgttgtcaaaacatgaggatggttaccgt
tatattcctcagctaggtgatgaagttgtatacctgagacagggccatcaagagtatcta
aaactagtcaagaattcagaggagggtccttggggtccttgggaatcaattaaggaaaac
atcaaagttgcggaaatttgcaaggttgaaagcctcgtttatgcttcactgcctggttcg
ggggagagttgctgtaaaatcaaacttagatttgtagacccttcttctgctatccttggt
aaagcattgaagttgactttgcctgaaattgattttaatgatttcattgttgagaaaacg
tggtatgatgcttctattggaagaaactggaccactggggaggaatgcgcggtttggtgg
agggattcaatttcagatgaaggtgggacttggtgggtaggtcgaattgttcggtgccag
gccaagtcacatgagtttcccgatagcccttggttaagatatgaggttcggtatgagaat
gatgatgaaacccatttgcattgtccttgggaattgcgtggaccgtccatagtagatgat
ccatcctcatgcgaacagccccatattgattctgaaagcaaagagaagcttctgtgtatt
ttttctaacttacaacagaaggacttgcaaacaatccaacaattgaatcaagctgttcag
aaggcggatttctgcaacagctttcctgtgcaattgttccctgaactaatccagtcgagg
ttagagaacgactattatagaagcttggaagctgtgaagcatgatataatggttatgatg
tcaaatgcccagcattacttcaagagaaatgaattgcaagcccggattaagcacatctcg
aaaaggtttaagaagaaactgtcaaagttgtag

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