Malus domestica (apple): 103419292
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Entry
103419292 CDS
T03194
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57-like
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdm03009
]
103419292
Enzymes [BR:
mdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103419292
Ribosome biogenesis [BR:
mdm03009
]
Eukaryotic type
90S particles
Helicases
103419292
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
Cas3-like_C_2
T4SS-DNA_transf
AAA_19
Motif
Other DBs
NCBI-GeneID:
103419292
NCBI-ProteinID:
XP_008355627
LinkDB
All DBs
Position
04:join(18715667..18715747,18715837..18715969,18716066..18716187,18716269..18716360,18716572..18716668,18716824..18716904,18716986..18717218,18717388..18717582,18717684..18717774,18718243..18718365,18718766..18718916,18719440..18719648)
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AA seq
535 aa
AA seq
DB search
MEEGTSFLFSGVNFNRKKFATDFSRFQNKESEKVVEDSSLLEIPKSEAEVEAEKEEPVVP
VKKRKRKGEVSEGVEGISVFKTSKSAKAAKAGKEKPGNEITEQKKKLNRQLERDSLTRKK
YNIHVSGNNIPSPLDNFADLSSRYGCEPYLLQNLAELGFKEPTPIQRQAIPVLLSGRECF
ACAPTGSGKTLAFVCPMLMKLKHTSKDGIRAVILCPTRELAAQTTRECKKMAKGNKFYIK
LMTKELARNADFSKIRCDILISTPLRLRLAIRKKKVDLSRVEYLVLDESDKLFELGLLKQ
IDSVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNTASDTIKQKLVFAG
SEEGKLLALRQSFKESLNPPVLIFLQSKERAKELYGELLFENVRVGAIHSDLSQTQRENA
VDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRCGRAGRSGEAIT
FYTEADIPYLRNIANVMSTSGCEVPSWIMALRKQKWKKHRPGRESISTQPKDEKE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggcacttcatttttgttctccggcgtcaacttcaaccggaaaaagtttgcc
acggacttctccagattccagaacaaagagagcgagaaagtggtagaagattcgagcttg
ttggaaattccaaaatctgaggcggaggtggaggcagagaaggaggagccagtagtgccg
gttaagaagaggaagcggaagggggaggtttccgagggtgtggaggggattagtgtcttt
aagacctcaaaatcggcgaaggcagcgaaagcggggaaagagaagcctggcaatgaaatc
acggagcagaagaagaagttgaatcggcaactcgagcgggattcgctgacgcgaaagaag
tataacattcatgtgtccgggaataacatcccttcaccacttgataattttgcagactta
tcctcaagatatggatgcgagccatatttacttcagaatttggcagaacttggatttaaa
gaaccaacgccaatccaaaggcaggctattccagtcctcttatctggtcgagaatgcttt
gcttgtgctccaactggatctggaaaaactcttgcttttgtttgtcccatgctaatgaaa
cttaagcatacatctaaggatggtatccgagctgttattctttgtccaacacgtgagtta
gctgctcagacaaccagagagtgcaaaaagatggcaaaaggaaataaattctacatcaag
ttaatgaccaaagagcttgcaagaaatgccgatttttcaaaaatacgctgtgatatactc
atttctactccacttcggttacggttggctatccggaaaaagaaggttgatttaagcagg
gttgagtatctggtattggatgagtctgataagctttttgagcttggcttgttaaagcag
attgattctgtggtcaaagcatgttcgaacccttcaattattcgctccttatttagtgct
actttacctgatttcgttgaggagcttgcccgcaccataatgcatgatgctgttcgagtt
atcattggcaggaaaaatactgcttctgacactatcaagcaaaaactggtctttgctgga
agtgaagaagggaagctattagcacttcgtcaaagctttaaggagagtctgaatccacca
gtgctgatatttttacaaagcaaggagcgagctaaggaactctacggagaactgttgttt
gagaatgtaagagttggtgccatacattctgatctgtcacaaacacagcgagaaaatgct
gtagatgacttcagagctggaaaaacatgggttttaattgccactgatgttattgctcgg
ggtatggatttcaaaggtgtcaactgtgtaattaattatgattttccagattctgcggct
gcgtacattcacaggattggtcggtgtggacgagcagggaggagcggagaagctattact
ttctacacagaggcagatattccatatctacggaatatagctaatgtgatgtcaacatca
ggttgtgaagttccgtcttggatcatggccttgcgcaaacagaagtggaaaaaacaccga
cccggaagagaatcgatatcaacccaaccgaaagatgagaaggagtaa
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