Malus domestica (apple): 103420061
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Entry
103420061 CDS
T03194
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103420061
Transcription factors [BR:
mdm03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
103420061
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
103420061
NCBI-ProteinID:
XP_028944613
LinkDB
All DBs
Position
11:join(24203843..24204749,24204883..24205211)
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AA seq
411 aa
AA seq
DB search
MSMWSSPPSSRPLTYGHVPPEMAGMVGLRDVFVVAPAAAYHHNTHLHHHYGHDPNLLSSS
DHHHSINASNNPATALGVGVIPLLTAAPCLAPPNMSNVDDDDEDTHTPAGMSMGMGMSMG
MGMMSGGHQRNNRSSSAAAAGGGGGIQLWQQNPPHFFKKTHHEAAVTTDLGVAHLNQGGG
GGGNNVINAGSAAASSGSSTMTCQDCGNQAKKDCTHRRCRTCCKSRGFDCATHVKSTWVP
AARRRERQLMSAAAGGGAGSNSGSTSSAKKPRLIGASQTTTSHTSTSNTTPPRSYDTSSS
HQDAGFKDPLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKINGHVFKGFLYDQGVDGR
DGFPNISELHLGGGGNGRRNGASSPILDPSDVYAASGAGLLGGSNFGNPIN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtggtcctcccccccttccagcagacccctcacctacggccacgtccctccg
gaaatggcgggcatggtcggccttcgcgatgtcttcgtcgttgccccagccgccgcctac
caccacaacacacatctccaccaccactacggccacgaccccaatctcctctcatcctcc
gaccatcaccactccatcaatgcctccaacaaccctgcaaccgctctcggcgtcggagtc
attcctcttctcacggccgccccttgcctcgccccacccaatatgtcaaatgtcgatgat
gatgacgaagatactcacactcctgcgggtatgagtatgggcatgggaatgagtatgggt
atgggtatgatgagtggcggccatcagcgcaacaacagaagctcctcggcagcagcagca
ggaggagggggagggattcaattgtggcagcagaacccgccacattttttcaagaaaact
catcatgaagccgccgttactactgatctaggcgtggcccacttaaaccaaggtgggggt
gggggagggaataacgttataaacgcggggtctgctgccgcctcgtcggggtcgtccacg
atgacgtgtcaagactgcgggaaccaggccaagaaggattgcacgcaccggcggtgcagg
acgtgctgcaagagccggggtttcgactgtgcgactcacgtgaagagcacgtgggtgccg
gcggctcggcgcagggagcggcagctgatgtctgcagcggctggcggtggggctgggtct
aattctgggtctacttctagtgccaagaagcctagactcattggcgcctctcaaaccaca
acttctcacacttccacttccaacactacaccccccagaagctacgacaccagctctagt
caccaagatgctggtttcaaagatccattgccgggacaagtacgtgcgccggcggttttc
aagtgtgtaagagtgaccgcggtggaggacggcgaggatgaatacgcataccaggctgtt
gtcaaaattaacggtcatgtgttcaaaggcttcttgtatgatcaaggagttgatgggaga
gacgggtttcctaacatctctgaattgcatttggggggtggtggcaatggcagaagaaat
ggggcttcttctccgatccttgacccgtcggatgtttatgctgcgtctggtgcaggattg
ctgggaggttcaaactttggtaatccaataaattga
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