Malus domestica (apple): 103420530
Help
Entry
103420530 CDS
T03194
Name
(RefSeq) chaperone protein ClpD, chloroplastic
Organism
mdm
Malus domestica (apple)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
NBD_SMAX1
AAA_7
nSTAND3
AAA_14
AAA_25
TniB
IstB_IS21
nSTAND1
TsaE
AAA_18
NACHT
Zeta_toxin
Torsin
Motif
Other DBs
NCBI-GeneID:
103420530
NCBI-ProteinID:
XP_008356811
LinkDB
All DBs
Position
06:join(25839320..25840053,25840492..25840631,25840720..25840949,25841099..25841207,25841288..25841418,25842275..25842376,25842466..25842747,25842837..25842925,25843031..25843325,25843471..25843704,25843882..25844115,25844345..25844668)
Genome browser
AA seq
967 aa
AA seq
DB search
MQVSSSSSSSVLIPSLQWWTPSLNSSTSNCCCTQFLRYDRSRSRSSGGGRQVFSLYPIRL
ANPSPPFASSFLSPFKARTFPTGPTGRRKTKLRIVAAVFERFTERAVKSVIFSQREARAL
GRNMVFTQHLLLGLIAEEEQHRHLHPNSHGFLGSGISIKQAREAVRAIWHHHSQSQTSAS
AEVDPSSRAASSSATDVPFSISTKRVLEAALEYSRARAHNFIAPEHITIGLFTADDGSAG
QVLKRLGVDVNQLLAEAASRLQVELVKDGREPSGGFQKSLSKKSTASGKKKDKSALDQFC
VDLTACASEGLIDPVIGRDTEVQRIIQILCRRSKNNPILLGESGVGKTAIVEGLAISIAQ
ADVPAFLLEKRVMSLDIALLMAGSKERGEMEARVTTLLSDIRKAGNIILFIDEVHTLIES
GTVGQRNKGSSLDIANLIKPPLGRGQLQCIAATTADEYRLHLEKDKAFARRLQPVWINEP
SQDDAVRILLGLREKYEAHHNCRYEPEAIIAAVYLAARYIPDRYLPDKAIDLIDEAGSRA
RMDAFKRKREQQICILSKSPDDYWQEIRTVQAMHEVVLATELKNSDASSVDDIRESSSSS
STSGDEPAVVGPEDIAAVASLWSGVPLQQLTADDRMLLVGLDEKLRKRVVGQEEAVAAIS
RAVKRSRVGLKDPDRPMATLLFCGPTGVGKTELTKALAASYFGSEEAMLRFDMSEYMERH
SVSKLIGSPPGYVGYGAGGTLTEAIRRRPFTVVVFDEIEKAHPDIFNILLQIFEDGHLTD
AQGRRVSFKNALVVMTSNVGSTIIAKGRQSSIGFLLADDEVTSYAGLKATVMEELKTYFR
PELLNRIDEVVVFHPLQKAQMLEIVNLMLQELKKRLMSLGMGLEVSESVKGLICEQGYDR
FYGARPLRRAITSIIEDPLSEALLAGGYKPGDTVVIDVDATGNPFIRNGSDQSVRLSNSS
IQHPSCS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgtcatcgtcgtcgtcctcctccgtgctgattccttcacttcaatggtggact
ccgtctctaaattcttctacttctaattgttgctgcactcaattcctccgttatgatcgc
agccgaagcagaagtagcggcggcggcaggcaagtcttctctctctacccaattcgcctc
gccaacccatcacccccttttgcttcttctttcctttcccccttcaaagctcgcaccttt
cccaccggccccaccggccggcgaaaaaccaagctccggatcgtcgccgccgtcttcgag
cggtttacggagcgagcagtcaaatccgtcatcttttcccaaagagaagccagagctctc
ggcagaaacatggtgtttacccagcacctgcttctgggtctgatcgccgaggaggagcag
caccgccatcttcatccgaattcccacggctttctgggctcgggcatctctataaagcag
gcccgggaagctgttcgcgccatttggcaccaccatagtcaaagtcagacttctgcttct
gcagaagttgatccttctagccgagctgcttcctcttccgccactgatgtccccttttca
attagcacaaagcgggtcctcgaggcggcgttggagtattcgagagctagagctcacaac
ttcattgcgccggagcacattaccattggtttattcaccgctgatgatggaagtgctggt
caggtcctcaaaagactgggggtagatgtaaaccagttgttagccgaggcagcctcgagg
cttcaagtagagcttgtcaaagatggtagagaaccatctgggggatttcaaaaatccctt
tccaaaaaatcaactgcttctgggaaaaagaaagataaaagtgctttggaccaattctgc
gtggatcttactgcttgtgctagtgagggactcattgatcctgttattggccgagacact
gaagttcagagaattattcagatactttgtcgcagaagtaaaaataaccccattcttctt
ggtgaaagtggggttggaaagacggccattgttgaaggactggcgattagtattgcacag
gcggatgtccctgcttttctcctggaaaaacgtgtaatgtccttggatatagcactatta
atggctggttcaaaagagaggggggaaatggaggcgcgtgttaccacattgttaagtgac
ataagaaaagcaggaaacattattctttttattgatgaagtacataccctcattgagtct
ggaacagttggacaaagaaataaggggtctagtcttgacattgccaatctaataaaaccg
ccccttgggaggggtcaattacagtgtattgcagccacaactgcagatgaatacaggttg
caccttgaaaaggataaagcatttgcacgaagattacaacctgtttggattaatgaacca
agccaggatgatgcagttaggattctattaggtctacgtgagaaatatgaggcccatcac
aactgcagatatgaaccagaagccattattgcagctgtgtatctagcagcaagatatata
cctgatagatatctacctgataaagctattgatctcattgatgaagcgggaagtagagct
cgtatggatgcctttaagaggaaaagagaacagcaaatttgtatactttcaaagtcacct
gatgactattggcaagaaattcggacagttcaggcgatgcatgaagtggtcctagcgact
gaactaaaaaatagcgatgcttctagtgtggatgatatcagagaatcctcctcttcatct
tccacatctggtgatgaacctgcagtggtgggaccagaggatatagcagcagttgcctca
ctatggtcaggagtccctcttcagcagctcaccgctgatgacagaatgcttctggtcggt
cttgatgagaagcttaggaaacgggttgttggtcaagaagaggctgttgctgccatttct
cgagctgttaagagatcccgggttggactgaaggatcctgacagacccatggcaacactg
ctcttttgtggtccgaccggggttggcaaaactgaattaacaaaagctttggctgcatct
tattttggatcagaggaagccatgctacggtttgacatgagtgaatatatggagcgccat
tctgttagcaaattaatagggtcacccccaggttatgttggctatggagctgggggcact
ctaaccgaagctattagaagacgaccttttacagtggttgtgtttgatgaaatagagaaa
gcccatccagatatcttcaacatccttctccaaatttttgaagatggccacctgactgat
gctcagggaaggagagtgtcatttaagaatgcgttggtagtgatgacgtctaatgttggg
tccactatcattgctaagggcagacaaagctccattggtttcttgcttgcagatgatgag
gtaacttcatacgccggactaaaagcaactgtaatggaagaactcaagacatattttcgt
ccagagttgctgaatcggatagacgaagtagttgtattccatccccttcaaaaggctcag
atgctcgagattgtaaacttaatgctacaagagctgaagaagaggctgatgtctctggga
atgggattggaggtgtctgaatctgtcaagggcctcatatgtgagcaaggctacgaccgg
ttttatggcgcccgcccgcttaggagggcgattacgtcaataattgaagatccgttgagc
gaagcgcttcttgccggaggttacaagcccggtgacactgtcgttatcgacgtagatgct
accggaaacccgttcataagaaatggatcagatcagagtgtacggttgtccaacagcagt
atacaacatccatcttgtagttaa
DBGET
integrated database retrieval system
