Malus domestica (apple): 103420530
Help
Entry
103420530 CDS
T03194
Name
(RefSeq) chaperone protein ClpD, chloroplastic isoform X2
Organism
mdm
Malus domestica (apple)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
AAA_7
nSTAND3
AAA_25
IstB_IS21
AAA_14
TsaE
nSTAND1
AAA_18
RuvB_N
NACHT
AAA_23
Zeta_toxin
ResIII
T2SSE
Torsin
Motif
Other DBs
NCBI-GeneID:
103420530
NCBI-ProteinID:
XP_008356811
LinkDB
All DBs
Position
6:27157799..27163501
Genome browser
AA seq
967 aa
AA seq
DB search
MQVSSSSSSSVLIPSLQWWTPSLNSSTSNCCCTQFLRYDRSRSRSSGGGRQVFSLYPIRL
ANPSPPFASSFLSPFKARTFPTGPTGRRKTKLRIVAAVFERFTERAVKSVIFSQREARAL
GRNMVFTQHLLLGLIAEEEQHRHLHPNSHGFLGSGISIKQAREAVRAIWHHHSQSQTSAS
AEVDPSSRAASSSATDVPFSISTKRVLEAALEYSRARAHNFIAPEHITIGLFTADDGSAG
QVLKRLGVDVNQLLAEAASRLQVELVKDGREPSGGFQKSLSKKSTASGKKKDKSALDQFC
VDLTACASEGLIDPVIGRDTEVQRIIQILCRRSKNNPILLGESGVGKTAIVEGLAISIAQ
ADVPAFLLEKRVMSLDIALLMAGSKERGEMEARVTTLLSDIRKAGNIILFIDEVHTLIES
GTVGQRNKGSSLDIANLIKPPLGRGQLQCIAATTADEYRLHLEKDKAFARRLQPVWINEP
SQDDAVRILLGLREKYEAHHNCRYEPEAIIAAVYLAARYIPDRYLPDKAIDLIDEAGSRA
RMDAFKRKREQQICILSKSPDDYWQEIRTVQAMHEVVLATELKNSDASSVDDIRESSSSS
STSGDEPAVVGPEDIAAVASLWSGVPLQQLTADDRMLLVGLDEKLRKRVVGQEEAVAAIS
RAVKRSRVGLKDPDRPMATLLFCGPTGVGKTELTKALAASYFGSEEAMLRFDMSEYMERH
SVSKLIGSPPGYVGYGAGGTLTEAIRRRPFTVVVFDEIEKAHPDIFNILLQIFEDGHLTD
AQGRRVSFKNALVVMTSNVGSTIIAKGRQSSIGFLLADDEVTSYAGLKATVMEELKTYFR
PELLNRIDEVVVFHPLQKAQMLEIVNLMLQELKKRLMSLGMGLEVSESVKGLICEQGYDR
FYGARPLRRAITSIIEDPLSEALLAGGYKPGDTVVIDVDATGNPFIRNGSDQSVRLSNSS
IQHPSCS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgtcatcgtcgtcgtcctcctccgtgctgattccttcacttcaatggtggact
ccgtctctaaattcttctacttctaattgttgctgcactcaattcctccgttatgatcgc
agccgaagcagaagtagcggcggcggcaggcaagtcttctctctctacccaattcgcctc
gccaacccatcacccccttttgcttcttctttcctttcccccttcaaagctcgcaccttt
cccaccggccccaccggccggcgaaaaaccaagctccggatcgtcgccgccgtcttcgag
cggtttacggagcgagcagtcaaatccgtcatcttttcccaaagagaagccagagctctc
ggcagaaacatggtgtttacccagcacctgcttctgggtctgatcgccgaggaggagcag
caccgccatcttcatccgaattcccacggctttctgggctcgggcatctctataaagcag
gcccgggaagctgttcgcgccatttggcaccaccatagtcaaagtcagacttctgcttct
gcagaagttgatccttctagccgagctgcttcctcttccgccactgatgtccccttttca
attagcacaaagcgggtcctcgaggcggcgttggagtattcgagagctagagctcacaac
ttcattgcgccggagcacattaccattggtttattcaccgctgatgatggaagtgctggt
caggtcctcaaaagactgggggtagatgtaaaccagttgttagccgaggcagcctcgagg
cttcaagtagagcttgtcaaagatggtagagaaccatctgggggatttcaaaaatccctt
tccaaaaaatcaactgcttctgggaaaaagaaagataaaagtgctttggaccaattctgc
gtggatcttactgcttgtgctagtgagggactcattgatcctgttattggccgagacact
gaagttcagagaattattcagatactttgtcgcagaagtaaaaataaccccattcttctt
ggtgaaagtggggttggaaagacggccattgttgaaggactggcgattagtattgcacag
gcggatgtccctgcttttctcctggaaaaacgtgtaatgtccttggatatagcactatta
atggctggttcaaaagagaggggggaaatggaggcgcgtgttaccacattgttaagtgac
ataagaaaagcaggaaacattattctttttattgatgaagtacataccctcattgagtct
ggaacagttggacaaagaaataaggggtctagtcttgacattgccaatctaataaaaccg
ccccttgggaggggtcaattacagtgtattgcagccacaactgcagatgaatacaggttg
caccttgaaaaggataaagcatttgcacgaagattacaacctgtttggattaatgaacca
agccaggatgatgcagttaggattctattaggtctacgtgagaaatatgaggcccatcac
aactgcagatatgaaccagaagccattattgcagctgtgtatctagcagcaagatatata
cctgatagatatctacctgataaagctattgatctcattgatgaagcgggaagtagagct
cgtatggatgcctttaagaggaaaagagaacagcaaatttgtatactttcaaagtcacct
gatgactattggcaagaaattcggacagttcaggcgatgcatgaagtggtcctagcgact
gaactaaaaaatagcgatgcttctagtgtggatgatatcagagaatcctcctcttcatct
tccacatctggtgatgaacctgcagtggtgggaccagaggatatagcagcagttgcctca
ctatggtcaggagtccctcttcagcagctcaccgctgatgacagaatgcttctggtcggt
cttgatgagaagcttaggaaacgggttgttggtcaagaagaggctgttgctgccatttct
cgagctgttaagagatcccgggttggactgaaggatcctgacagacccatggcaacactg
ctcttttgtggtccgaccggggttggcaaaactgaattaacaaaagctttggctgcatct
tattttggatcagaggaagccatgctacggtttgacatgagtgaatatatggagcgccat
tctgttagcaaattaatagggtcacccccaggttatgttggctatggagctgggggcact
ctaaccgaagctattagaagacgaccttttacagtggttgtgtttgatgaaatagagaaa
gcccatccagatatcttcaacatccttctccaaatttttgaagatggccacctgactgat
gctcagggaaggagagtgtcatttaagaatgcgttggtagtgatgacgtctaatgttggg
tccactatcattgctaagggcagacaaagctccattggtttcttgcttgcagatgatgag
gtaacttcatacgccggactaaaagcaactgtaatggaagaactcaagacatattttcgt
ccagagttgctgaatcggatagacgaagtagttgtattccatccccttcaaaaggctcag
atgctcgagattgtaaacttaatgctacaagagctgaagaagaggctgatgtctctggga
atgggattggaggtgtctgaatctgtcaagggcctcatatgtgagcaaggctacgaccgg
ttttatggcgcccgcccgcttaggagggcgattacgtcaataattgaagatccgttgagc
gaagcgcttcttgccggaggttacaagcccggtgacactgtcgttatcgacgtagatgct
accggaaacccgttcataagaaatggatcagatcagagtgtacggttgtccaacagcagt
atacaacatccatcttgtagttaa
DBGET
integrated database retrieval system
