Malus domestica (apple): 103420583
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Entry
103420583 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103420583
04121 Ubiquitin system [BR:
mdm04121
]
103420583
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103420583
Membrane trafficking [BR:
mdm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103420583
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103420583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING-like
zf-RING_16
Prok-RING_4
zf-HC5HC2H_2
Zn_ribbon_FGT1_2
Rad50_zn_hook
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
103420583
NCBI-ProteinID:
XP_008356868
LinkDB
All DBs
Position
03:7283848..7284948
Genome browser
AA seq
366 aa
AA seq
DB search
MAMPSPPPTTSYWCYRCTRFVRVFALDSALLCPHCETGFLEEIETMPQPLLQPNHLRRRF
PSSHRHEEERGQNPTPTSRRVRRASGDRSSLFNPVIVLRGTEADTESNTFELYYNDAAGS
GLRPLPPTMSELLMGSGFDRLLEQLSQIEINGLGRPENPPASKSAVESMPVIQIADTHVG
SDSHCAVCKEAFELGSEAREMPCKHIYHPDCILPWLSMRNSCPVCRHELPADQNNRNSDP
GIEEETMGLTIWRLPGGGFAVGRFSGGRRPGERELPVVYTEMDGGFNGNGAPRRVLWASR
SRGSESRGIRSAFRNIASFWGRLRSNSSSSRSGSESESGPGLTRSQSSSVFGRFVHRRRR
AWVLDD
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggccatgccttcgccgccgccgacgacgtcgtattggtgttacagatgcactcgcttc
gtccgcgtgtttgctctggactccgccctcttgtgcccccactgcgaaaccggcttcctc
gaagagatcgagacgatgccacagccgctactgcagccgaaccatctccgccgtagattc
ccgtcctcccaccgccacgaggaagaacggggccaaaacccgactccgacctcccgccgg
gtacgacgggcctccggcgaccggtcttctctattcaacccggtcatcgtcttacgtggc
accgaggccgataccgagtccaacacattcgaactctactataatgacgccgcggggtcg
gggctccgaccacttccgcccaccatgtccgagcttttaatgggttcgggcttcgaccgc
ttacttgaacagctctcccagattgaaatcaacggtttgggcagacctgaaaacccgcct
gcgtctaaatccgctgtggaatctatgcccgttattcaaatcgccgatacccacgtcggg
tcggactcgcactgcgccgtttgcaaagaagcattcgaactcgggtcggaggcccgagaa
atgccctgcaagcacatataccacccggattgtatcctcccctggctctcaatgcgtaac
tcgtgcccggtttgtcgacacgagctgcccgctgaccaaaacaaccgtaattcggatccg
ggtatcgaggaagagacgatgggtttgaccatctggagattacccggcggcggatttgcc
gtggggagattctccggcggcagaagacccggcgagagggaattaccggttgtgtacaca
gaaatggacggcgggttcaatggtaacggggctccaagaagggtattatgggcatcgagg
agtagagggagcgaaagtcgcgggattcggagtgcttttcgtaatatagcttcgttctgg
gggcgattacgttccaattcatcgtcttcgaggtccgggtcggaatctgaatccgggccg
ggtttgactagaagtcagtcaagttcggtgtttgggcggttcgtacaccggcgtaggagg
gcgtgggtgttggatgattag
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integrated database retrieval system
