Malus domestica (apple): 103420834
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Entry
103420834 CDS
T03194
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1-like
KO
K28108
shortage in chiasmata 1
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdm03036
]
103420834
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Meiosis-specific proteins
Others
103420834
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GFIT
Other DBs
NCBI-GeneID:
103420834
NCBI-ProteinID:
XP_028961987
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Position
07:complement(join(33944107..33944205,33944345..33946054,33946156..33946725,33946861..33948075,33948179..33948256,33948493..33948564,33948643..33948729,33948817..33948903,33949636..33949965))
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AA seq
1415 aa
AA seq
DB search
MRTRYLNIDYFTATPTQTPDSTTFLHLPIPHLPPSNLSTPFDGLQLSRFDSELEVSLQIE
QLPIGDALSKFFSDVLPQKIVIDVADLEAGDSSPSSRSFGSGSRELQFSEQKAEDLKEEK
RSEDQISFGSKTHEADFRKKDNGRRDAEKDAHPYEMLHFETPELDVFLENAYIYEKEGLP
FLSEVPEAENNLTFDSADLRITIGMEGVGLTKFQFGMHEMLNRTLEFPWEVHESVHTVED
VHSEYSMDQKAYMFEDDCSYKDQMHFYQNFPLLEVNEITLPTLTGLSVEDELSSVYENIE
PQHWDKKDNLNGKELLGTKEYGTLECLLDLRSDLGSLDITPEMDLLSMVEMPQMQGNITY
QGTSMDACFQSRSLVVFEEFQILDLNSSQHFEVLISTLTANEPETCDWMFHGDINFNTLI
VSHELALVDGTFKSLPVPVLSDHEKICSSYVVMEETLTNLQPLPLSASDRIYLDWHFLEK
DKCNCQISFSHQKILEDTNSLSTCFDWDSYDDGKLVYDFAFSDDAVDEFNTEENKELQEL
PSDGIPMLAGHLGDTSGKLSGGAFPQKKIGEHIDKRGAERASSLFKSMSQFNDISFFLNP
QKASTGGNSNCAVTTVANATSPKGEQSYSISAPVENMNDQQSEELSDIFPGQEKNDQQSE
ELSDIFPGQEKNDMRYKEGADEVEASSMPLPNLSVPPAVEAERFQQSMASFPEMVIVVNT
QNLDKEMIVSRRSTYQKILAMEKEGVQVVERDSDLPVDIIISSAICLVWYDCKNIGKKAT
TIDEASSCLPLCIENIATNVLTLLSFTFSGCIMIFEGENSFLSTVMEYSDGLYAAAAGLG
IDLQLFNSYSSELTDEIILSCMGHATKSKRFMYPRMPESESLAESFLTRFPSVNALTAHA
ILSSGGLLKEFLESSHETRMSVIQKYHVPDESITLFSTLCKYGEPADSKSIMTDCSSSVS
SGPDSGRYNQNPVLERKKRKYNGSPDKYELQTNEFLHLEPLNQFSTNILNPSTASKLDDS
CMSKSPKIIDEFRKSRFSQNDLFDQEVGLDTDMMMNPFKVFEPYDSQISKGPQVLNDIKR
SCSSLKDKLSGQKRGSDTPIMKNFDFYNKNSEVLHEDLKGEVIDLKGSPVLDEDFSFIGN
PMKFSSQMPELEMDSTRKSKAARKLSFGLSSHRTFPTAAEINSTPTVWRSAENLRKISQV
GANDYSDTDLEHDVFPLTNRNKPLEETFMKRAGGKSQGLHFHENDISPYGGMQGLHLYGN
DISHYGGTPLSRALHSGSSQKNTPWTIEFLNRIKEKSRLRQQSLPGDLSGPSLGYPGNVS
KITKRRSPSILDFYKYQGGNTPRKFPEKKKQKRPLQSSSSSKNETISAPALTEWTPIDKR
ARQTQSFATNDSGNQTKLVWSDGAHGVRKKFQMQT
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcgctacctcaacatcgactacttcaccgccactccaacccaaaccccggac
tccacaaccttcctccaccttccgatccctcacctccctccctccaatctctccaccccc
ttcgacggcctccaactctcccgcttcgactccgaactcgaagtctcgctccaaatagag
caattgccaatcggagacgctctctccaagttcttctccgatgttcttcctcagaagata
gttatcgatgttgcggacctcgaggccggcgattcgtctccgagttctagaagtttcggt
tccggaagccgtgagttgcagttttcggagcagaaagccgaggatctcaaagaagagaag
agatcggaggatcagatatcttttggttccaagactcatgaggctgactttcgaaaaaag
gataatggcagaagagatgcagagaaagatgcacacccatatgaaatgctccactttgaa
acaccagagttggatgtattcttggaaaatgcttacatttatgagaaagaggggctcccg
tttctttcagaagttccagaggctgagaataatttaacatttgatagcgctgatcttaga
atcactataggtatggaaggggttggattgactaagtttcaatttggtatgcatgaaatg
cttaatcgtacactggagtttccttgggaagttcatgagtcagttcatacagttgaagac
gttcattcggagtattccatggatcaaaaggcttatatgtttgaagatgattgttcttac
aaggaccaaatgcacttctatcagaatttccctctattagaagtaaatgagattactctg
ccaactttgacaggtttgtctgtagaggatgaactttcttctgtttacgaaaatattgag
ccccagcattgggataaaaaagataacctgaatggcaaggagcttttgggtacaaaggaa
tatgggaccttggagtgtcttttagatcttcgatctgatctcgggtcccttgacattacc
cctgaaatggatttattaagcatggtggaaatgccacagatgcagggaaacatcacatat
caagggacgtccatggatgcttgtttccagtctcgaagcctggttgtttttgaagaattt
cagattcttgatttgaactcgtctcagcattttgaagtcctcattagtaccctaacagca
aatgaaccagaaacctgtgactggatgtttcatggagacataaacttcaatactttgatt
gttagtcatgagctagcccttgtcgatggcacattcaaatcattgcctgtgcctgttctc
tctgatcatgaaaagatatgttcttcatatgttgttatggaggaaacactaactaactta
cagccgctacccctatctgcatcagataggatttacttggattggcattttctcgagaaa
gataaatgcaactgtcaaatttctttctcccatcagaaaatcttggaggatacaaattca
ctgagcacgtgttttgattgggactcctatgatgatggaaagctggtgtatgattttgct
ttctccgatgacgctgtagatgagtttaatacagaagaaaacaaagaattacaggagttg
ccctctgatggcattcctatgcttgctggtcatcttggagatacttcaggcaaattgtca
ggcggcgcttttccacagaaaaaaattggagagcatattgataaaagaggcgctgagagg
gcttcatcacttttcaagtctatgtcacaattcaatgatatcagctttttcttgaatccg
cagaaggcctctacaggtggaaatagtaattgtgcagttaccacagtagctaatgctaca
tctccaaagggagagcagtcctattctatatctgctccagttgagaatatgaatgatcag
cagtcagaggaactctcggacatttttcctggtcaggaaaagaatgatcagcagtcagag
gaactctcggacatttttcctggtcaggaaaagaatgatatgagatataaagaaggtgca
gatgaagtagaagctagcagtatgccccttcctaatctttctgtgccacctgcagtggaa
gctgagcgttttcagcagagcatggcctctttccctgagatggtcattgttgtaaacact
caaaatcttgataaggaaatgatagtatctagaagaagtacctaccaaaaaattcttgca
atggagaaagaaggggtacaagtagtagaacgtgattcagatttacctgtggatatcata
atcagttctgcaatttgtttagtgtggtatgactgcaaaaacattggaaagaaagcaacc
actattgatgaagcttcttcatgcttacctttgtgcattgagaatattgccacaaatgtt
ttgacgttgctgagtttcactttcagtggctgcattatgatctttgagggagaaaacagc
ttcctctccactgtaatggagtactcagatggactttatgcagcagcagcgggcctggga
attgatttgcagcttttcaactcatattcatctgagttgactgatgaaattatattgagc
tgcatgggacatgccacaaagtcgaaaaggtttatgtatcctcgaatgcctgagtcggaa
agtcttgcagaatcattccttaccagatttccttcagtaaatgctttgacagctcatgca
atattgtcttcaggaggcttgctcaaagagtttcttgaatcgtcccatgaaaccaggatg
agtgtaatccaaaaatatcatgttcctgatgaaagtatcacactatttagtactttatgc
aaatatggtgaaccggcagattctaaatcaattatgacagactgctcctcttcagtgtct
tcaggtccagactcgggaagatataatcagaatcctgttttggaaagaaagaaacgaaaa
tacaatggtagtcctgacaaatatgagttacaaacgaatgaattcttgcacctggagccg
ttgaaccaattcagtaccaacatcttgaatccttctacagcttccaagttagatgattca
tgtatgtcaaaaagccccaaaataattgatgagttcagaaagtctaggttctctcagaat
gacttgtttgatcaagaagtgggcttagatacggatatgatgatgaatccttttaaggtt
ttcgagccatatgattctcaaatctccaaagggcctcaggtattaaatgatataaaaagg
tcctgttcatcgttgaaggataagctgtcaggtcagaaacgaggatcagatacgcctatc
atgaagaattttgatttctataacaagaattctgaggttctgcatgaggaccttaaaggg
gaagttattgacctaaaaggcagtcctgtattagatgaggacttttcttttattggcaac
cctatgaaattctcatctcagatgcctgagttggaaatggattccacaaggaagtctaaa
gctgcaagaaaattgtcatttggtttaagtagtcaccgtactttcccaacagctgctgaa
atcaactcaactccaactgtttggcgttctgcagaaaacctgagaaaaatttcgcaagtt
ggagccaacgattactcagatacagatctcgaacatgatgttttccccttaacaaaccgt
aacaagcccttagaggagactttcatgaagagggccggggggaaatcccaagggctacat
ttccatgaaaatgatatatcaccttatggaggaatgcaagggctacatctctacgggaat
gatatatcacattatggaggaacaccactctcaagagctctccattcaggcagttcacag
aaaaatactccctggacaatagagtttctgaacagaatcaaggaaaagagcaggttgcgt
cagcagtcccttcctggtgacttatctggccctagtttgggttatccagggaatgtatca
aagattaccaagagaagaagtccgtctattcttgatttttacaagtaccaaggtggcaac
actccaagaaagttcccagaaaaaaaaaagcagaagcgacctttacaatcatcaagctca
tcgaagaatgaaacaatttcagctcctgctcttaccgagtggacacctattgacaaaaga
gcaagacagacacaatcttttgcaacaaatgatagtggaaaccaaactaagctggtgtgg
agtgatggagctcatggtgtcaggaaaaagtttcagatgcaaacatga
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