Malus domestica (apple): 103420838
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Entry
103420838 CDS
T03194
Name
(RefSeq) RHOMBOID-like protein 1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdm01002
]
103420838
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
103420838
Peptidases and inhibitors [BR:
mdm01002
]
Serine peptidases
Family S54: Rhomboid family
103420838
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
Motif
Other DBs
NCBI-GeneID:
103420838
NCBI-ProteinID:
XP_008357105
LinkDB
All DBs
Position
03:join(7610813..7611189,7612245..7612408,7613052..7613215,7613305..7613564,7613986..7614112,7614383..7614505)
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AA seq
404 aa
AA seq
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MGFLGLNQNQYTEKGEIFMERGQSAAPSSLDIKVVRPRQSDNVVQPAGQGSVTPQPRRSF
SDYNPFKSWVSWLVPLIVVANIVVFVVTMFVNDCPKNSGRCIGRFLGRFSFQPFKENLFL
GPSSNTLEKMGALDAQRVVHQHQGWRLISCMWLHAGVFHVLANMLSLLFIGIRLEQEFGF
VRIGILYVMSGFGGSLLSALFIQYGISVGASGALFGLLGSMLSELISNWTMYANKLAALL
TLVFIIIINLAAGLLPHVDNFAHIGGFVSGFLFGFVFLIRPQFKWLTQRNAPPGLIATPV
KSKHKTYQYVLWVLSLILLIVGYTLGLITLFRGVNLNDHCSWCQYMSCIPISKRSCKSQN
VYCLSSQIGNQLNLTCVSNGRNGTYSLSDPSASRAQQLCTDLCS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggttttctgggtctgaatcaaaatcaatacaccgaaaaaggggagatttttatggag
agaggccaatctgctgcgccgagcagcttagatataaaggtggtgcgtccacggcagagc
gacaacgttgtgcaaccggcggggcaaggttcggtgacgccgcagccgcggcggtcgttc
agcgactacaacccgttcaagagttgggtgtcatggctggtgccgttgattgtggtggcc
aacattgtcgtttttgtggtgaccatgttcgtgaacgattgccccaagaactccggcagg
tgcattggtcggttcctcggccgcttctcctttcagcccttcaaggaaaacctgtttctt
gggccatcttcaaacacattagaaaagatgggtgctctagatgcgcagagagtggttcat
caacaccaggggtggcggctgatctcatgtatgtggttacatgctggagttttccatgtg
cttgccaatatgctgagtcttttattcattggaattcggcttgagcaagaatttggattt
gttcgaattggtattctatatgtcatgtccggttttggcgggagtttgctttcagctctt
tttattcaatatggtatttctgttggtgcttctggtgcactttttggtttactaggaagc
atgctttcggagctcatatcaaattggacaatgtatgcgaacaagttagcagcattgctt
actctcgttttcatcatcataataaacttagcagcgggacttctaccacacgtggacaac
tttgctcatattggaggatttgtttccggatttctttttggatttgtgtttttgatccgc
ccccagtttaaatggcttacccaacggaatgctcccccgggacttattgctactccagtt
aaatccaaacacaagacgtatcaatatgtattgtgggtcctctcactgatactattgatt
gttgggtatactcttggcctgattactctttttcgaggggtcaatctaaatgatcactgt
tcctggtgtcagtatatgagctgcatccctatttcaaaacggagttgcaaatcacaaaat
gtttattgtttgtcgagccagatagggaatcaactgaacttaacgtgcgtaagcaacggt
agaaatgggacatattcattgtcggatcccagcgcctcccgggctcagcagctatgcact
gacctttgcagttga
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