Malus domestica (apple): 103421173
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Entry
103421173 CDS
T03194
Name
(RefSeq) serine/arginine-rich splicing factor RSZ22A-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103421173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103421173
Spliceosome [BR:
mdm03041
]
Common components
Common spliceosomal components
SR proteins
103421173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
RRM_5
DUF2457
Motif
Other DBs
NCBI-GeneID:
103421173
NCBI-ProteinID:
XP_008357431
LinkDB
All DBs
Position
08:complement(join(11203312..11203348,11203593..11203706,11203925..11204183,11204919..11205007,11205143..11205231))
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AA seq
195 aa
AA seq
DB search
MSRVYVGNLSPRVSEGELEDEFRVFGNIRSVWVARRPPGYAFVDFDDSRDAEDAIRELDG
KNNWRVELSHNTRGGGGGGGGGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGG
GGGGGGGRRRSRTPPRYRRSPSYGRRSYSPRGRSPRRRSLTPRGNSRSRSPPYRGREELP
YANGNGLKDRRRSRS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgtgtacgtcggaaacttgagtcctcgagtgtccgagggagagctcgaagac
gagtttcgtgtttttggaaatattagaagcgtgtgggttgctcggagaccaccgggttac
gcttttgttgactttgatgacagtagagatgcagaggatgcaatccgtgaattagatggt
aagaataactggagagttgagctttcacacaacactagaggtggtggtggtggtggtggt
ggtggtggtggtggtggtcgtggtggaggtggtcgtggccgctctggcggttctgatttg
aagtgctatgagtgtggtgagcctggccattttgctcgtgaatgtcgtctacgtggtggt
ggtggtggaggtggtggtggaaggcgtcgtagccgcactccccctcgctatcgcagaagt
cctagttatggtcgcaggagctacagtcctcgtgggagatcccctagacgtcgcagtttg
acaccacgagggaatagccgcagcaggtccccaccataccgtgggcgggaggagttgcca
tatgccaatggcaatggtctaaaggatcgccgccgaagcaggagttaa
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integrated database retrieval system
