Malus domestica (apple): 103421424
Help
Entry
103421424 CDS
T03194
Name
(RefSeq) autophagy protein 5 isoform X1
KO
K08339
autophagy-related protein 5
Organism
mdm
Malus domestica (apple)
Pathway
mdm04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103421424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103421424
03029 Mitochondrial biogenesis [BR:
mdm03029
]
103421424
Membrane trafficking [BR:
mdm04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103421424
Mitochondrial biogenesis [BR:
mdm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103421424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
103421424
NCBI-ProteinID:
XP_028963253
LinkDB
All DBs
Position
08:complement(join(30407033..30407370,30409056..30409190,30409940..30410080,30410624..30410711,30410912..30411001,30412333..30412399,30412756..30412880,30412970..30413089))
Genome browser
AA seq
367 aa
AA seq
DB search
MDMEAQRFVWDGAIPLQIHLHESDVATLPAPPPALVLNLYILAPRIGYLPLLASLLKPYF
SSALPPRLDTIWFEYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILIPCDD
DDTVKWSFINSLKEAAYIINGNCKNVMNMSQPDQVELWRSVLNGNLEAYFRVSSKLKLGT
VGEEWAAKNLCTPKSRPNMGETDVSGQVKAGRVPVRLHVWSVSEDFDDLEDAPQIDSWDK
VSYINRPVEIPGGEGGRCFTLNDAIKSLLPEYFPDKSLINEESPTVAEEDEQKVSAEDAR
AEEEVEKSGEQTESCNQFVDAEIKLVRIQGIEPKLEIPFSWVANNLLNPEHFLHICVYLK
VPQVSTM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaagcacagaggtttgtatgggacggagcaattcctctgcagattcatctc
catgaatccgacgtcgccactcttcctgctcccccacctgccctggtactaaacctttat
atcttagctcctcggattggatacctgccattgttggcctcacttctaaaaccttacttc
agctctgcactccctcctcgcttagacaccatttggttcgagtacaaaggcttgcctttg
aaatggtatataccaacaggagttctgtttgatcttctatgtgcggaaccagaaagacct
tggaatctcacggtgcattttagaggatatccggggaacatattgattccttgtgatgat
gacgatactgtaaagtggagctttattaattctttgaaagaggctgcatatataatcaat
ggaaactgtaagaatgtgatgaacatgtctcaaccagatcaggtggagctctggcgttca
gtcttaaatggtaatttggaagcctacttccgggtatcttctaaacttaagcttggaaca
gttggggaagaatgggcagcaaagaatttatgcactccaaaatccagaccaaatatgggt
gaaactgatgtttctggacaagtgaaggcaggtcgagttccagttcgcttacatgtttgg
agtgtcagtgaggattttgatgatttagaagatgcacctcagattgatagctgggacaaa
gtctcttacattaaccggcctgttgaaataccaggaggagaaggaggtagatgcttcact
ctaaatgatgcaatcaagagccttttgccagagtattttcctgacaaatccttgatcaat
gaagaatcaccgacggtagctgaagaggatgaacaaaaggtttccgctgaagatgcgagg
gccgaagaggaagtagaaaagtcaggtgaacaaacagagtcttgcaaccagtttgttgat
gccgaaatcaagctagtccgtatccaaggtattgagccgaaattggagataccgttctct
tgggtcgcaaacaacctgctgaaccccgagcactttcttcatatctgtgtgtatttgaaa
gtaccacaagttagtaccatgtga
DBGET
integrated database retrieval system
