Malus domestica (apple): 103421445
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Entry
103421445 CDS
T03194
Name
(RefSeq) SWI/SNF complex component SNF12 homolog isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mdm
Malus domestica (apple)
Pathway
mdm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103421445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103421445
03036 Chromosome and associated proteins [BR:
mdm03036
]
103421445
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103421445
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103421445
PBAF complex
103421445
GBAF(ncBAF) complex
103421445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
103421445
NCBI-ProteinID:
XP_008357705
LinkDB
All DBs
Position
09:complement(join(742448..742523,742800..744331))
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AA seq
535 aa
AA seq
DB search
MSMNNNNPPKSLGAPSSPFGNVGMVGQSMSANPAFQQSQAQTQIGAGYQGQFQLSQAQAI
AQAQSKAHAQFQAQLQAQAMALNQNQSVGMANLGSSSPSFSTPGNASAKRYPQKPPMRPS
GVSPMHTMSPLRTMELNPAARKKKQKLPDKQLQDKVATILPESALYTQLLEFEARVDSAL
ARKKVDIQEALKSPPCIQKTLRIYVFNTFANQVRSIPQKPNADPPSWTLKIVGRILEDGV
DPDQPGMVQKSNPFYPKFSSFFKRVTISLDQRLYPENHIILWENARSPAPHEGFEVKRKG
DKEFTVNIRLEMNYAPEKYKLSQPLMEVLGIEVETRPRIIASIWHYVKARKLQNQHDPSF
FNCDPPLQKVFGEEKMKFTMVSQKISQHLFPPQPIHLEHKIKLSGNSPAGTACYDVLVDV
PFPIQRELSALLANSEKNKEIDTCDEAICAAIKKIHEHRRRRAFFLGFSQSPVEFINALI
ESQNKDLKLVAGVASRSAEKQRRSDFFHQPWVEDAVIRYLNRKPGAGSDAAPGSI
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaacaataataacccacctaagagtcttggagccccttcgtcgccctttggc
aatgtcggtatggtagggcaatcgatgtctgcaaaccctgcatttcaacaatcgcaagcc
caaacacagattggggctggttaccaaggtcagtttcagctctcccaagcccaggctatt
gcccaggctcagtcaaaagctcatgcccaattccaagctcagttgcaagctcaggcgatg
gcccttaaccagaaccaatcagttggcatggcgaatttggggtcatcttcaccttccttt
tccacacctgggaatgcaagtgccaagcgctacccccaaaaaccaccaatgcgcccttct
ggtgtttctcctatgcacacgatgtcacctctgagaaccatggaactcaaccctgctgct
cgtaaaaagaagcagaagcttcccgataaacagctacaggacaaagtagccaccattctg
cctgaatctgctctctacacccagcttctcgagtttgaggctcgtgttgattctgccctt
gcaagaaagaaggttgacatccaagaggcccttaaaagcccgccttgcattcagaaaacg
ctgcggatttatgtttttaacacttttgctaatcaggttcgctcgattccacagaagcca
aatgctgatcccccttcttggacacttaaaatagttgggaggatcttggaagatggggtt
gatcctgaccagcctggaatggtccagaaatcaaatcccttttatccaaagttctcatct
ttcttcaaaagagtaacaatttctttggatcagagactatatcctgagaatcatatcatt
ttgtgggaaaatgctagatcgccggcacctcatgagggcttcgaggtgaagagaaaaggg
gacaaagaatttactgtgaacatacgcttggaaatgaattatgcgcctgagaagtataag
ctttctcaaccgttgatggaagttcttggtattgaggttgaaacccgccccaggatcata
gcttcaatctggcactatgtgaaagctaggaaattgcagaaccagcatgacccctctttc
tttaactgtgatccaccacttcagaaagtatttggggaagaaaagatgaaattcaccatg
gtatcgcagaagatatctcagcatttgttccccccgcaacctatacatttggagcataag
ataaagctttcaggaaatagtccagctggaactgcatgttatgatgtgttggttgatgtt
cctttcccaatccaaagggaactgtctgctcttttggccaactccgagaagaacaaagag
attgatacctgtgatgaagcaatatgtgcagctatcaaaaaaatccatgagcatcgtcgc
aggcgagcttttttccttgggtttagtcaatctcctgtagaatttatcaatgcactgatt
gaatctcaaaacaaagatttaaaacttgtagctggagtagcaagccgtagtgctgaaaaa
cagaggcgatcagatttcttccaccagccatgggttgaagatgctgttatccggtatctg
aatcgtaagccaggtgcaggaagtgatgctgctcctggaagcatatga
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