Malus domestica (apple): 103421445
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Entry
103421445 CDS
T03194
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mdm
Malus domestica (apple)
Pathway
mdm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103421445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103421445
03036 Chromosome and associated proteins [BR:
mdm03036
]
103421445
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103421445
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103421445
PBAF complex
103421445
GBAF(ncBAF) complex
103421445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
VC2046
Motif
Other DBs
NCBI-GeneID:
103421445
NCBI-ProteinID:
XP_008357705
LinkDB
All DBs
Position
9:complement(761770..764625)
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AA seq
540 aa
AA seq
DB search
MSMNNNNPPKSLGAPSSPFGNVGMVGQSMSANPTFQQSQAQTQIGAGYQGQFQLSQAQAI
AHAQSKAHAQVAHAQFQAQLQAQAMALNQNQSVGMANLGSSSPSFSTPGNASAKRYPQKP
PVRPSGASPMHTMSPLRTMELNPAARKKKQKLPDKQLQDKVATILPESALYTQLLEFEAR
VDSALARKKVDIQEALKSPPCIQKTLRIYVFNTFANQVRSIPQKPNADPPTWTLKIVGRI
LEDGVDPDQPGMVQKSNPFYPKFSSFFKRVTISLDQRLYPENHIILWENARSPAPHEGFE
VKRKGDKEFTVNIRLEMNYAPEKYKLSQPLMEVLGIEVETRPRIIASIWHYVKARKLQNQ
HDPSFFNCDPPLQKVFGEEKMKFTMVSQKISQHLFPPQPIHLEHKIKLSGNSPAGTACYD
VLVDVPFPIQRELSSLLANSEKNKEIDTCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEF
INALIESQNKDLKLVAGVASRSAEKQRRSDFFHQPWVEDAVIRYLNRKPGAGSDAAPGSI
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaacaataataacccacctaagagtcttggagccccttcgtcgccctttggc
aatgtcggtatggtagggcaatctatgtctgcaaaccctacatttcaacaatcgcaagcc
caaacacagattggggctggttaccaaggtcagtttcagctctcccaagcccaggctatt
gcccatgctcagtcaaaagctcatgcacaagtggctcatgcccaattccaagctcagttg
caagctcaggcgatggcccttaaccagaaccaatcagttggcatggcgaatttggggtca
tcttcaccttccttttccacacctgggaatgcaagtgccaagcgctacccccaaaaacca
ccagtgcgcccttctggtgcttctcctatgcacacgatgtcacctctgagaaccatggaa
ctcaaccctgctgctcgtaaaaagaagcagaagcttcccgataaacagctacaagacaaa
gtagccaccattctgcctgaatctgctctctacacccagcttctcgagtttgaggctcgt
gttgattctgcccttgcaagaaagaaagttgacatccaagaggcccttaaaagcccgcct
tgcattcagaaaacgctgcggatttatgtttttaacacttttgctaatcaggttcgctca
attccacagaagccaaatgctgatccccctacttggacacttaaaatagttgggaggatc
ttggaagatggggttgatcctgaccagcctggaatggtccagaaatcaaatcccttttat
ccaaagttctcatctttcttcaagagagtaacaatttctttggatcagagactatatcct
gagaatcatatcattttgtgggaaaatgctagatcgccggcacctcatgagggctttgag
gtgaagagaaaaggggacaaagaatttactgtgaacatacggttggaaatgaattatgca
cctgagaagtataagctttctcaaccattgatggaagttcttggtattgaggttgaaacc
cgccccaggataatagcttcaatctggcactatgtgaaagctaggaaattgcagaaccag
catgacccctctttctttaactgtgatccaccacttcagaaagtatttggggaagaaaag
atgaaattcaccatggtatcgcagaagatatctcagcatttgttccccccgcaacctata
catttggagcataagataaagctttcaggaaatagtccagctggaactgcatgttatgat
gtgctggttgatgttcctttcccaatccaaagggaactgtcttctcttttggccaactcc
gagaagaacaaagagattgatacctgtgatgaagcaatatgtgcagctatcagaaaaatc
catgagcatcgtcgcaggcgagcttttttccttgggtttagtcaatctcctgtagaattt
atcaatgcactgattgaatcccaaaacaaagatttaaaacttgtagctggagtagcaagc
cgtagtgctgaaaaacagaggcgatcagatttcttccaccagccatgggttgaagatgct
gttatccggtatctgaatcgtaagccaggtgcaggaagtgatgccgctcctggaagcata
tga
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