KEGG   Malus domestica (apple): 103421688
Entry
103421688         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein
  KO
K10728  topoisomerase (DNA) II binding protein 1
Organism
mdm  Malus domestica (apple)
Pathway
mdm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103421688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mdm03032]
    103421688
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103421688
DNA replication proteins [BR:mdm03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    103421688
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     103421688
SSDB
Motif
Pfam: PTCB-BRCT BRCT BRCT_2 LIG3_BRCT RTT107_BRCT_5 TopBP1_BRCT0 ECT2_BRCT0
Other DBs
NCBI-GeneID: 103421688
NCBI-ProteinID: XP_070683150
LinkDB
Position
08:join(16566589..16566768,16566863..16566905,16567352..16567473,16567832..16567939,16568279..16568423,16568513..16568604,16569240..16569333,16569477..16569981,16570063..16570205,16570399..16570757,16570857..16571024,16571940..16572230,16572346..16572735,16572819..16572863,16572945..16573033,16573581..16573671,16573880..16573957)
AA seq 980 aa
MRKTAAFQGANVFMSRNLVPPEMFDALHDALKHNGANVFLCCDPSRTAPNDYHVIESSDH
VKFEDLRAKGCNLLGPQCVFACASEHRALPKQGFTCCLAMDGSKVLASGFQGDEKIKIEK
LVTAMGGVLQTQTSSDVNFVIVKNVLAGKYKWALNTLKKPIVTVNWLYQCWKEHRTVSQD
SFRVLPFSGLTISVTRIPADERKKIEKLIIENGGKYSAELTKKCTHLISDAPEGDKYKVA
RRWGHIQIVTQTWFDQSISKRACLHEESYPVQGGSISSNKSVRGCFTLQNSQSSASGNLQ
FVPPSVVADSNLTAAPCSGTVDSDLEATVSQKMTTIFSYAPFVVKNEDSKAPTFDPLESK
SEVNLDGCVADDSQSEGDDLYLSECRISLIGFEASELRRLVNMVRRGGGSRYMSFNDKLT
HIVVGTPSEIEKKEVRGLAALGVIHVVRTAWLEDCDREKKEIPVLQRHIAHDLLLPEGAL
TSMTNKVKGGILMAHLSMPADQLQRNTSAATGMGMLEKNREEKPEINMKGDGSMEAAVGL
SKRSKLTVLNGKSKVQLNDKTNGLQKVQHDFNVQNGKPSSVFKGRIFCFSNSFPEDKRGQ
IIEWVIQGGGELVDGHIKQKVHFTIECHGVRPISLDATESTYVSSHWIRSCLEDGCLVDV
TSHILYAPLPCLIPLPGYENFRFCVSQYNEKDRVLLRNLCYTLGAKLVEKFTRKVTHLLC
KFTNGPKYEAALKYGIHTITSDWIYECVKQNKVVALDQFCPKEVTAEDREAGLCTTSQYP
TQAFQTIFGGNSSECPSQLQDPRNSSAEFIGNRNDSLREEAKESSFSNKKARVSKVDSSG
VHLSIPVCTTGVSKKVPGEVSSVVPDVASAIEDLLEQTSKIHDQQSPGRSLCDGNIFSPD
CSILREERSDSHSVIGLSRSNWLNSAGKKDDMHNPSGEQKAGFYDGFSETQTESQVVGYE
EDLSGRQMLIDRVRTRSSLS
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgcggaaaacggcggcgtttcagggggccaacgtcttcatgtcgcggaacctggtcccg
cccgagatgttcgacgctcttcacgacgcgcttaagcacaacggcgccaatgtcttcctc
tgctgcgacccttctcgcaccgcccccaacgactaccacgtcatcgagtcctccgatcac
gtgaagtttgaggatcttagagccaaaggttgcaatttgctaggtcctcaatgcgtgttt
gcttgtgcgagtgagcatagggctctgcctaaacaagggtttacttgttgccttgcaatg
gatggttccaaagtacttgcgtcgggttttcagggggatgaaaagattaagatagagaag
ttagtaacagcaatggggggagttttgcaaacgcaaacatcatcggatgttaactttgtc
attgtgaagaatgtattggctggaaaatacaagtgggctttaaatactttgaagaagcca
attgtcacggttaattggttatatcagtgctggaaagagcatcgcactgtgtctcaagat
tcatttagggttcttcctttttctgggctgacaatctctgtaaccagaattccagcagat
gagcgaaagaagattgaaaagcttatcatagaaaatggtggaaaatattctgctgaacta
acaaagaagtgcacgcatttaatttctgatgctccagaaggtgacaaatacaaggttgca
cgaagatggggccacattcagattgtaactcaaacatggtttgatcaatctatttctaaa
agagcttgtcttcatgaggagtcctatcctgttcaaggtggttctatatcttcaaataaa
agtgtaaggggttgctttactttgcagaatagccaaagcagtgctagtgggaacttgcaa
tttgtgccaccatcggtggttgcagattcaaacttgacagctgccccttgttctggaact
gtggattctgatttagaagctactgtctcacaaaagatgaccactatattttcttatgct
ccttttgttgtgaaaaatgaggatagtaaggcacctacctttgatcccttggagtccaaa
agtgaagtgaaccttgatggttgtgttgccgatgattctcagtctgaaggtgatgacctg
tacttgtcagaatgtagaatatctcttattggctttgaagcttccgaattgcgtagactg
gttaatatggttcgcagaggtgggggctcccgatatatgtcgttcaatgataaattgacg
cacatagtagttggtactccttcagaaatcgaaaagaaagaggtaaggggtcttgcagct
ttaggggtcattcatgttgttagaactgcctggcttgaagattgtgatcgtgagaaaaaa
gagatccctgttctccaaaggcacatcgcccacgatctacttcttcctgaaggagcacta
acaagtatgactaacaaggttaaaggtggaatcttgatggctcatctaagcatgcctgct
gatcaattacaaaggaacacaagtgctgcaactggaatgggaatgttggagaagaacaga
gaagagaaaccagaaattaacatgaaaggtgacggatccatggaagcagctgttggacta
tccaaacgaagtaagctaactgtcctaaatggcaaaagtaaggttcaattaaatgataaa
acaaatggtctacagaaggtgcaacatgatttcaatgttcagaacggcaagccatcatct
gtctttaaggggagaatattttgcttttcaaattcctttcctgaagataagagaggtcaa
atcattgaatgggtaattcaagggggaggagagttagttgatggccatataaaacagaaa
gtgcacttcactattgaatgtcatggtgtgagacctatatccctggatgctactgaaagt
acatatgtatcaagtcactggatcaggtcgtgtttggaggacggatgcttggtggatgtt
actagtcacattctatatgctccacttccctgcctgattcctttgcctggatatgaaaac
ttccggttttgtgtttctcaatataatgagaaagatagagttttactaagaaatttatgt
tatacacttggagctaaattggtggaaaagtttacgaggaaggttacccatttgctgtgc
aagtttaccaatggaccaaagtatgaggctgctcttaaatatggtatacatacaattacg
tccgactggatatatgaatgtgtgaagcagaataaagtcgttgctcttgaccaattttgt
ccaaaagaagtcactgctgaagatcgggaggcagggctgtgcaccacaagtcagtatcct
acacaagcttttcaaacaatatttggaggcaattcgtctgagtgtccaagtcagttacaa
gacccgagaaactcatctgctgaatttattggcaatagaaatgacagcctcagagaagag
gccaaagaatcaagcttttccaataagaaggcaagggtttcaaaagtagactcttctggg
gtgcatttaagtattcctgtctgtaccactggagtcagcaagaaagttccaggtgaagtt
tcttcagttgttcctgatgtagcttctgctattgaggacttactggagcagacaagtaag
attcatgatcagcaatcgccagggagaagtttgtgcgatggcaatattttttcaccggat
tgttcaattcttcgtgaagagcgctcggattctcactccgtcattggattatcgagatct
aactggttaaacagtgctgggaaaaaagatgacatgcacaatccttccggagaacagaag
gctggcttttacgatggttttagcgaaacacagaccgagtctcaggttgttggttacgag
gaagatttgtcaggccggcaaatgcttatagatagagtacgaacccgaagcagcctgtct
tga

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