Malus domestica (apple): 103421696
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Entry
103421696 CDS
T03194
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
mdm
Malus domestica (apple)
Pathway
mdm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103421696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103421696
Membrane trafficking [BR:
mdm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103421696
Hops complex
103421696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
TPR_Vps41
zf-C3H2C3
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_5
zf_RING_Vps8_fungal
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
103421696
NCBI-ProteinID:
XP_008357959
LinkDB
All DBs
Position
09:complement(join(9060314..9060670,9068773..9070545,9070626..9070955,9071044..9071223,9071433..9071654))
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AA seq
953 aa
AA seq
DB search
MYQWRKFEFFEEKLAGKCAIPEEVEGKIECCSSGRGKVVIGCDDGTVSFLDRGLNFSYGF
QAHSSSALFLQQLKQRNYLVTIGEDEQITPQQSAMCLKVFDLDRMQSEGTSSSTTSPDCI
GILRIFTNQFPEAKITSFLVLEEAPPILLIAIGLDNGSIYCIKGDIARERITRFKLQVEI
HSDKSQSSITGLGFRVDGQALQLFAVTPSSVSLFILQNQPSNTRRQTLDQIGSNMNSVAM
SDRLELIIGRPEAVYFYEVDGRGPCWAFEGEKKFLGWFRGYLLCVIADQRNNSNTFNIYD
LKNRLIAHSLAVKEVSHMLCEWGNIILIMADKSALCIGEKDMESKLDMLFKKNLYTVAIN
LVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMAQYIHTIGHLEPSYVIQKFLDAQRIYN
LTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVDKLNVFIKSEDGVGEHKFDVETAIRVCR
ATNYHEHAMYVAKKAGKHEWYLKILLEDLGRYEEALQYISSLEPSQAGVTVKEYGKILIE
HKPVETIEILMRLCTEDGESSKRGAANGSYLTMLPSPVDFLNIFTHHLPWLMDFLEKYTD
KVKDSPAQVEIHNTLLELYLSTDLSFPSISQASNGEDLNLRARSGAAATSRSQSNGKLIA
DTKDSNKEKDRFEKQQKGLRLLKSAWPSDLEFPLYDVDLAVILCEMNAFKEGLLYLYEKL
KLYKEVIACYMQAHDHEGLIDCCKRLGDSGKGGDPTLWADLLKYFGELGEDCSKEVKEVL
TYIERDDILPPIIVLQTLSRNPCLTLSVIKDYIARKLEQESKLIEEDRRAIEKYQETTSA
MRNEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCIHSFHQRCLGDNEKECPVCAPEYK
SVLETKRSLEQNSKDQDRFFQQVKSSKDGFSVIAEYFGKGVISKTTNGPTGAS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggaggaaattcgagttcttcgaggagaaattggcgggaaagtgcgcgatt
cccgaggaggtggaagggaagatcgagtgttgctcgagcggcagagggaaggtggtgatc
ggctgcgacgacggcaccgtcagcttcctggaccgcggcctcaacttcagctacggattc
caagctcactcctcctccgcgctcttccttcagcagctcaagcaacgcaactatttggtg
acaattggagaagatgaacaaattactccgcagcaatcggcaatgtgcctcaaggttttc
gacctggatagaatgcagtccgagggcacgagctcaagcacaacgagccctgattgcatt
ggaatcttgcggatattcaccaaccaatttcctgaagcaaagattacatcatttttagta
ctagaggaggcacctccgatactgcttatagctattggcttggataatggttcgatttac
tgcattaaaggggatattgctcgagaacgaatcacccggtttaagcttcaggtggaaatc
cattctgacaagagccagtcctcaattacgggactggggttcagagtggacggtcaagct
cttcagttgtttgctgtaactccttcctctgtgagcttgttcatcttgcagaatcaaccc
tcaaacacaaggcggcagaccctagatcagattggaagtaatatgaacagtgttgcaatg
agtgatcgcttggagttgataattggtcgacctgaggccgtgtatttttatgaagttgat
gggcgtggaccatgttgggcttttgaaggagaaaagaaatttttagggtggtttcgtgga
taccttctttgtgttattgcagatcaaagaaataacagcaacactttcaacatttatgac
ttgaagaaccgtttaatcgctcacagcctagcggtcaaagaggtttctcacatgctttgt
gaatggggcaacataatacttatcatggctgacaaatcagctttgtgcattggggagaag
gatatggagagcaagttagatatgctctttaagaagaatctttatactgttgccatcaac
cttgttcaaagtcagcaagcggatgctgccgcaactgcagaagtgctgagaaagtatggg
gatcatctatatagcaagcaagattatgatgaggcaatggcacagtatatccataccatt
ggtcacctcgagccttcttatgtgatacagaagtttctagatgcacaacgaatctacaac
cttacaaattacttggaaaaattgcatgagaaggggcttgcttccaaagatcataccact
cttctactgaattgctatacaaaattgaaagatgttgacaaactaaatgtgttcattaaa
agtgaggatggtgttggggaacataaatttgatgtggagactgcaataagagtctgccgt
gccaccaactaccatgagcatgcaatgtatgttgctaaaaaggctgggaagcacgaatgg
tacttaaagatcttacttgaagatcttggccgatatgaggaagctttgcaatatatttca
agccttgaaccaagccaagctggagtgacagtgaaagagtatggtaagattcttatagag
cacaagcctgtggaaacaattgagatactcatgaggctgtgcactgaggatggtgaatca
tccaagagaggagccgctaatggttcatacctgacaatgttgccatctccggttgatttt
ctcaacatcttcacccatcatcttccctggcttatggattttcttgaaaaatataccgac
aaggtcaaggactctcctgcacaagtagaaatccataacacgctcttggagttgtacttg
tccactgacttgagcttcccatcaatatcacaagctagcaatggtgaagatcttaatctc
agggctagatcaggtgcagctgcaacatcaagaagccagtccaatgggaaattgattgct
gataccaaagattcaaacaaggaaaaggaccgttttgaaaagcaacagaaagggctacga
cttcttaagagtgcatggccatctgacctggaatttccgctttatgatgttgaccttgcc
gtaattctttgtgaaatgaatgcatttaaggaaggcctgttgtatctctatgaaaaattg
aaactgtataaagaggtgattgcttgctacatgcaagctcatgaccatgagggtttgatt
gattgctgcaaacgactaggggattcagggaagggtggggaccccactctttgggcagat
ctgctaaaatattttggtgaacttggagaagattgctccaaagaagtgaaggaagttttg
acatatatagaaagggatgacatattgcctcctattattgttcttcaaactttgtccaga
aatccatgtctcacactctctgtcattaaggattacattgccagaaagcttgaacaagaa
tcaaagctgatcgaagaggaccgtcgagcaattgaaaagtatcaggaaaccacatctgca
atgagaaacgaaattcaggatcttaggacaaatgccagaatctttcagctcagcaagtgc
actgcatgcactttcaccctcgatctcccagctgtgcattttatgtgtatccactcgttc
catcagcgttgcctcggggataatgagaaggagtgtcctgtatgtgctcctgaatacaaa
tctgttctcgaaacaaaaagaagtctagagcagaactccaaagatcaggatcggttcttc
cagcaagttaaaagttcaaaggatggtttttctgtgatcgccgagtattttgggaagggg
gtgatcagcaaaaccactaatggacccacaggtgcttcttga
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integrated database retrieval system
