KEGG   Malus domestica (apple): 103421752
Entry
103421752         CDS       T03194                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like isoform X1
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
mdm  Malus domestica (apple)
Pathway
mdm04144  Endocytosis
mdm04517  IgSF CAM signaling
mdm05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    103421752
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103421752
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    103421752
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103421752
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mdm04812]
    103421752
Membrane trafficking [BR:mdm04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    103421752
Cytoskeleton proteins [BR:mdm04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     103421752
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT140_1st WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_WDR3_2nd Tricorn_2nd PD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_SPT8 eIF2A WD40_MABP1-WDR62_2nd Ge1_WD40 DUF2582 NBCH_WD40 BNR_3
Other DBs
NCBI-GeneID: 103421752
NCBI-ProteinID: XP_008358016
LinkDB
Position
09:complement(join(12112547..12112611,12112718..12112776,12112929..12113035,12113207..12113270,12113343..12113428,12113544..12113632,12113816..12113897,12114420..12114462,12114553..12114626,12115186..12115255,12115414..12115483,12115613..12115707,12115876..12115952,12117498..12117583,12118236..12118305))
AA seq 378 aa
MAAVEVHKFAQCITCHAWSRDRSMLAFCPNNHEVHIYALLQGKWEKLHVLQKHDQIVSGI
DWSARANKIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVKWNPRENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNILLATASTDGKCRIFSTFIKVVDA
KESRTGPFADSKFGEQILQLDLSFSWSFGVRWSPSGNTLAYVGHSSMIYFVDDVGPSPLA
QNVAFRDLPLRDVLFLSERLLIGVGFDCNPMVFAADLHGIWHFIKFLGERKTTSSGPKYG
SQFSEAFGKLYGQQKHGLNNDANEHSRSRGRVHENCINCIVPLGEPGSSKVTRFSTSGLD
GKVVVWDMENQADLSEYL
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggcggcggtggaagttcacaagttcgctcagtgcatcacttgccacgcttggagccgt
gatcgctccatgctcgcattttgtccgaacaaccatgaagttcacatctatgctctgttg
caaggaaagtgggagaagctgcacgttcttcagaagcatgaccaaattgtatctgggata
gactggagcgcgagggcaaacaaaatagttactgcatctcatgatcggaattcttatgtc
tggaatctagaaggatcagagtgggtaccaacccttgttatccttcggctaaatcgtgct
gcactttgtgttaagtggaatccaagagaaaacaagtttgctgttggaagtggggcaaaa
actgtttgtatatgctactacgagcaagagaataactggtgggtcagtaaacttatcaga
aaaaggcacgactcttctgtgacaagtgttgcttggcatcccaataatattcttctagca
acagcatctacagatggaaaatgccgtatattttccacttttattaaggtcgtcgatgca
aaggaatcaagaacaggcccatttgctgattcaaaatttggagagcaaattcttcagctt
gatctatcattttcttggtcatttggcgtgaggtggtcaccgagtggcaataccttagca
tatgtaggccatagttctatgatttacttcgttgatgatgttggaccttctcctctggct
caaaatgttgcattccgtgatttgcctctccgtgatgtgttatttctgtctgaaagatta
cttataggcgtggggtttgattgcaatccaatggtgtttgcggcagatttacatggaata
tggcattttatcaaatttcttggggaaagaaaaacaacatcttcaggtccgaaatatggt
tcacagttttctgaagcattcggaaagctgtatggccaacaaaaacatggattgaacaat
gatgcaaatgaacattcaagatcacgaggacgtgtccatgagaactgcatcaattgtatc
gtgccgcttggagaaccagggagttctaaagtaacgcgcttcagcacatcaggattggat
ggaaaagtagttgtgtgggatatggagaaccaggcagatttatcggagtatttgtag

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