KEGG   Malus domestica (apple): 103422402
Entry
103422402         CDS       T03194                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
mdm  Malus domestica (apple)
Pathway
mdm04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103422402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103422402
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mdm04147]
    103422402
Membrane trafficking [BR:mdm04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    103422402
Exosome [BR:mdm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103422402
  Exosomal proteins of other body fluids (saliva and urine)
   103422402
  Exosomal proteins of colorectal cancer cells
   103422402
  Exosomal proteins of bladder cancer cells
   103422402
SSDB
Motif
Pfam: VPS28 GDH_C DAHL DUF7784 ARM_KNTC1_3rd
Other DBs
NCBI-GeneID: 103422402
NCBI-ProteinID: XP_008358688
UniProt: A0A498IX96
LinkDB
Position
10:40598349..40598978
AA seq 209 aa
MEVKLANDKREREMYDSFAELYAIIKTTEKLEKAYVRDVITSSAYETECQKLIAHFKTLA
STLKDTIPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAASSMTSSAAAVAECTQN
FITAMDSLKLNMVAVDQVHPLLSDLSTSLGKLTFLPPDFLGKVKLKEWIARLSKMGAADE
LTEQQSRQLHFDLESSYNSFMAALPNYGT
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaggtcaagttggccaatgacaagcgtgaaagagaaatgtatgatagttttgccgaa
ctatacgccattatcaagaccactgagaagcttgaaaaggcgtatgttcgggatgtgatc
acttcttctgcgtatgagactgaatgccaaaaactcattgcccactttaagacattggca
tccacgcttaaggacaccatcccgagcatcgagcggtttgcagatacatacaagatggac
tgcccagcagctataaaccgccttgtgacctcaggggtgcctgccacagtggagcaccgg
gctgctgcagcttcctccatgacttcctcagctgctgctgtggcagagtgcacacagaat
ttcatcaccgcaatggactccttgaagctgaacatggtggcagttgatcaggtgcacccg
ctgctctcagacctctcaacgtcccttgggaagttaacctttctgccaccggactttttg
ggaaaggtgaagttgaaggaatggattgcaaggctgtcgaagatgggagcagctgatgag
ttgacggagcagcagtcaaggcagcttcactttgatctcgagtcctcttacaactcgttt
atggcagctttgccgaattatggtacttga

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