KEGG   Malus domestica (apple): 103422499
Entry
103422499         CDS       T03194                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103422499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103422499
   03041 Spliceosome [BR:mdm03041]
    103422499
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103422499
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103422499
Spliceosome [BR:mdm03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    103422499
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 OB_RNB RRM_RdRP1_2 Ntox35 PHM7_cyt BRAP2
Other DBs
NCBI-GeneID: 103422499
NCBI-ProteinID: XP_008358788
LinkDB
Position
03:complement(join(2212089..2212613,2212886..2213055,2213213..2213312,2213439..2213602,2213951..2213991,2214246..2214301))
AA seq 351 aa
MGSKSNAGHPHTGDGASPGKIFIGGLAKDTTNATFTKHFGKYGEIVDSVIMKDRFTGTPR
GFGFITYADPSVVDTVIEETHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSSVSE
DELKSFFSEYGKVVEHQIIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMEGTQVEI
KKAEPKKASNPPSAPAYGSNSRARSFNDGFGGYGSSYGSFDGGFGPGPYRTPGGLGGRYG
GGYGYGYGSDSGEFGSGYGNFGSSSLGGYRGETSLGYSSRFGPYGGGYGGGYNASGLGGY
GRGSEGYGSYGGSNYGGGYDSGPGATYGGGAGGPYGRGGYSSSSRYHPYGR
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgggttcgaagtcgaatgccggccatcctcacacaggcgatggcgccagccctggaaag
atcttcatcggtggattggcaaaagacactacaaatgctacatttaccaagcactttggg
aaatatggagagatagtggactcagtgataatgaaagatcgcttcacgggtaccccacgg
ggatttgggtttattacctatgccgatccatcagttgttgacacagttattgaggaaact
catgttattaatggaaagcaggttgagatcaagcgaaccattccgaaaggtcaagggcaa
tcaaaggattttaagacaaagaagatatttgttggtggcattccatcatcagtctctgag
gatgagttgaaaagtttcttctctgagtatgggaaagtggtggaacaccaaatcatacga
gatcatgagaccaatcgttctagaggctttgggtttgttatttttgacagtgaggaagtt
gtagatgagttgttatctaaaggaaacatgattgatatggagggtacccaggtggagatc
aagaaagctgaaccaaagaaagcctcaaatccaccatctgctcctgcatatggtagcaat
tctagggctcgttctttcaatgatggctttggtggatatggcagttcttatggtagtttt
gatggagggtttggccctggaccctataggacaccaggtggtcttggtggtagatatggt
ggtggttatggctacggttatggtagcgatagtggcgaatttggcagtggttatgggaat
tttggcagcagtagcttaggtggctatcgaggtgagacttcccttggttattctagccgc
tttggaccatatggtggtggttatggtgggggctataatgcgagtggtttaggtggttat
ggccgaggcagtgaaggctatggaagttacggaggttcaaactatggtggtggctatgac
tctggtcctggggctacttatggtggaggagcaggtggaccatatggaagggggggatat
agtagcagtagtcggtaccacccctatggaaggtag

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