Malus domestica (apple): 103422728
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Entry
103422728 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K27753
GRAS family protein LISCL
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103422728
Transcription factors [BR:
mdm03000
]
Eukaryotic type
Other transcription factors
GRAS
103422728
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
DUF2642
KDM5_C-hel
Motif
Other DBs
NCBI-GeneID:
103422728
NCBI-ProteinID:
XP_070664459
LinkDB
All DBs
Position
11:complement(join(8047558..8050038,8054297..8054381,8054592..8056783))
Genome browser
AA seq
1585 aa
AA seq
DB search
MDPSSYQLPDSNSNFIDQTLSPNFNEYPSSDPFVDLSFLGQNPSNSALSPSLSPEGDDSD
YSDSVLRYINQVLMEEDMETKPCMFHDPLAVQAAEKSLFEVLGGKFPPSPNQHPLNFESP
DGRSSATFSDHSGNNSSSLSSSTSHLDDSRSSVDVIEHKPSILQNPIPENFVFQSKAKSQ
FSSNGNGLVGSYVSEPMVSNLFRERELVLQFNRGVEEASKFLPRGQLIVNVENNKPYTVA
NGKAENVVVKTEKDEGEYFPTSSRGKKSHEREDADLEVGRSTKQSAVYEETEADLSEIFD
KVLVCGEGKPKPIVSEGEEVCLDEANKALQQNGQSVGTSNGKTRAKKKGDKKEVIDLRTL
LISCAQAVSSDDRRTANELLKQIRHHSSPFGDSSQRLAHCFANGLEARLAGTGTQIYTAL
SSKRTSAADMLKAYQTYFEACPFMKVAIIFANHMISKLAEKAETLHIIDFGILYGFQWPA
LIRCLSRRAGGPPKLRITGIELPQSGFRPEERVQETGHRLAKYCERYNVPFEYNGIAKKW
EAIQYEELKVKRDEVLAVNCLFRFKNLLDETVVVNSPRDTVLNFIRSMNPDIFIHSVING
SYNAPFFVTRFREALFHFSAMFDMFDTNLSREDQMRLMFEEEFLGREVVNTVACEGSERV
VRPETYKQWQARNMRAGFKQLPLNRELMNKLRAKVKLGYHRDFMVDEDGNWMLQGWKGRI
LYSSSCWVPSSFRFVFVSVESNRQINAIFTFMEYAPEDLRVLEFRIVPRYFSVIVMDHPT
VNGSPDYLNGFSIDDLAFSPHSTQFSNLTNEYQFNQFSPDLNFVDNHFSLPPDFEQGNIV
PKVSLTTSGESSVPSNSLNPPDGRSLSLPTVVSVGGVDSSSDDSDFSEAVFKYVNQILLE
ENIEKKPCMFFDPLGLRVTEKSFYDVLGQRYPFSPNQQPLHINPNVESPGGNNSGSCSDC
SGSNNSPSPGTSNSNDPQRVGDSGDPKSSFPQTTLPSDNPFQFNSHSSSQLSVPLENRMT
SVGDRRHVGGGQRLDDMLQGSSVEEFVAQNIYTDSDSILQFQRGLEEASKFLPKSTQLLV
DLESNTVSPEVKASVPMVTVKKEKSERKNSPNGSKGRKNREREDVDLEEGRSSKQSAVYI
EKTEESELSEMFDKVLLSTGGNNESQCGNVAFKNEASKTLQPGQPQGSNGNGGKARGKKQ
GKKKETVDLQNLLILCAQAVSTNDFRTTSELLKQVRQHASPNGDGSQRLAHFFANGLEAR
MGGTDTGTQKFYTSLVKRSSAVDMLKSYQVHLSACPFKRMCVLFKNKMILKMAEKATTLH
IVDFGILYGFQWPFLIQHLSKRRGGPPKLRITGIEVPQPGFRPAEWIEETGRRLARYCER
FNVPFEYNAIASQDWESIQLEDLKTERNEVLAVNCMLRFKNLLDETVEVNCPRDGVLQLI
RRMKPDIFVHSIINGSYNAPFFVTRFREALFHYSSLYDAFDINIPRDNEERLRFESEFYG
REAMNVIACEGVERVERPETYKQWQVRCMRAGLQPLQLDQDLVKILKDKVKAWYHKDFVV
DQDSDWMLQGWKGRIVYASSCWVPA
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagttcttatcaactgcccgattccaattccaatttcatcgaccagacactt
tcccccaatttcaatgagtacccaagcagcgatccctttgtggatcttagctttctgggc
caaaaccctagcaactctgctctgtctccgagcttgagccccgagggagatgacagtgac
tactctgacagtgtgctcaggtacataaaccaggtgttaatggaggaggatatggagaca
aagccctgtatgtttcatgaccctttggctgtccaagccgctgagaaatctctctttgag
gttcttggtgggaagtttccgccttctccgaatcagcatccgcttaattttgagagccct
gatggtcgttcttctgcaacctttagtgatcatagtggaaataatagctctagtcttagt
tctagtactagccatttggatgattctcggagtagcgttgatgttattgagcataagccc
tctattttgcaaaacccaattccggaaaactttgttttccagtcaaaggccaagtctcag
ttttcgtcgaatgggaatggattggtgggttcttatgtgagtgagcctatggtttctaat
ttgtttagggagagggaattggtgttacagtttaacagaggggtagaggaggctagtaag
tttcttcctagaggtcaactgattgttaacgttgagaataacaagccgtacacagtggcg
aatggaaaggctgaaaatgtggtggttaagacggagaaggatgaaggcgagtattttcct
actagttcgagaggaaagaagagtcatgagagggaagatgcagatttggaggttgggagg
agtaccaagcaatcagctgtttatgaggagacggaggctgatctatcggagatttttgat
aaggtgcttgtttgtggtgaggggaaacccaagcctattgtgagtgaaggtgaagaagtc
tgtctggatgaagcaaacaaggctctgcagcagaatgggcaatctgttggaaccagtaat
ggaaagactcgtgccaagaaaaagggcgacaagaaggaagtgatagatttgaggactcta
ctcatttcatgtgcacaagctgtttcttctgatgatcgtaggactgctaatgagctacta
aagcagattaggcatcactcttccccatttggcgatagctcgcagaggttggctcattgc
tttgcaaatggccttgaagcacggttggctggcactggaactcagatatatactgctcta
tcttctaaaagaacgtcagctgctgatatgctgaaggcttaccaaacttattttgaagcc
tgcccgttcatgaaggtcgcgataatcttcgcaaaccacatgatttcaaaattagctgag
aaagcagaaacactgcatattatagattttggaatcctctacggttttcaatggcctgct
ctcattcgttgcctctcaagaagagctggtggacctccaaaactacgcattacagggata
gagcttccccaaagtggttttcgacctgaagaaagagtccaagagacagggcatcgtttg
gcaaagtattgtgagcggtataatgttcctttcgagtacaatggcatagcaaagaaatgg
gaagctatccaatatgaggaactcaaagtcaagagagatgaagtgcttgctgtgaattgt
ctgttccggtttaaaaacctacttgacgagacagttgtggtaaacagcccaagggatact
gttctaaatttcattaggagcatgaatcctgatatctttatccatagtgtcattaatgga
tcttacaatgccccattcttcgtcacacgcttcagggaggctctattccacttctctgca
atgtttgatatgtttgataccaatttatctcgtgaggatcagatgagattgatgtttgag
gaagagttccttggacgagaggttgtaaacacagtagcttgcgagggctctgagagagtt
gtgaggcctgagacatataagcagtggcaggctcggaacatgagggctgggttcaaacaa
ttgccattgaaccgtgaactcatgaacaaattaagggccaaggtgaaactggggtaccac
cgtgatttcatggttgatgaagatggaaactggatgctgcaaggatggaagggcagaatt
ctctacagttcctcctgttgggtaccgtctagttttcgttttgtatttgtctcagttgaa
tctaatcgtcaaataaacgcaatttttacttttatggaatatgccccggaggatttgagg
gttttagagtttagaattgtacccaggtatttttctgtgatcgttatggatcatccaact
gtcaatggaagtcctgattacttgaatggtttcagtattgatgatctagccttctcaccc
cattcaactcaattctcaaatctcacaaatgaataccaatttaaccagttctctccggat
cttaactttgtggacaatcatttttcccttccgcccgatttcgaacagggtaatattgtt
cctaaagtcagtttgaccacaagtggagagtcatctgttccatctaatagtttgaatcca
cctgatggacgctcattgtctctgcctacggttgtgagcgtcggaggagtagacagttcc
tccgatgacagtgatttctctgaagctgttttcaaatacgtaaaccagattcttttggaa
gagaacatagagaaaaagccttgcatgttctttgatccgttgggtcttcgtgtgactgag
aaatcgttctatgatgttcttggtcaacggtaccccttttcacccaatcagcaaccactt
catatcaatccgaatgttgagagtcctggtggtaataattctgggagttgtagtgattgt
agtggtagtaataatagtcctagtcctggtactagcaattccaatgatcctcaacgggtt
ggcgattcgggagatccaaaatcttcttttccacaaactacccttcccagtgacaaccct
ttccagttcaattcacattcgagttcacagttgtctgttcctctggaaaatcgcatgact
agtgttggtgataggcggcatgttggtggtgggcagcgccttgatgatatgctacagggc
tcctctgtagaagagtttgtggctcagaatatatatacagatagtgattctatcttgcaa
ttccagagagggttagaggaagctagtaaattccttccgaaaagcactcagctgcttgtt
gatctggaaagcaacacagtgtctccagaagtgaaagcaagtgtgccgatggttactgtc
aagaaagaaaagagtgagcggaagaactcacctaatgggtcaaagggaagaaagaatcgc
gagcgggaagatgttgatcttgaagaagggaggagtagcaagcagtctgcagtttatata
gaaaagactgaagagagtgaattgtctgagatgtttgacaaggtgttgctgtctactggc
ggaaataatgaatctcagtgtggcaatgttgcttttaagaatgaagcaagcaagaccttg
cagcctggacagccacaaggatctaatggtaatggcgggaaggctcgtggtaagaaacaa
ggaaagaagaaggaaactgtggatttgcagaatctcctgattttgtgtgcacaagccgtg
tctaccaatgattttaggaccactagtgaactgttgaagcaggttaggcagcacgcttct
cctaacggtgatggatctcaaaggttggctcacttctttgcgaatggtcttgaggctcgt
atgggtggtactgacaccggaacccaaaagttttatacgtcccttgtcaaaaggtcatca
gccgttgatatgttgaaatcttaccaagttcatctttcagcttgccctttcaagagaatg
tgtgtgctcttcaaaaacaagatgattttgaagatggccgagaaagcaacaacccttcat
attgtcgattttggtatcctgtatggtttccagtggccattcctcatccagcatctttca
aagagacgtggtggacctccgaagctacgcattaccgggatagaggttccccaacctggg
tttcgtccagcagagtggattgaagagactggacgtcgcttggcaagatattgtgagcgt
tttaatgtaccttttgagtacaatgctatagcttcacaagattgggaatccatccaactg
gaggaccttaagactgaaaggaatgaggtgcttgctgtgaactgtatgttacggttcaag
aacctacttgatgagaccgttgaagtgaactgtccaagggatggtgttctacaactaatc
agaaggatgaaaccagatatttttgtccactctattatcaatggttcctacaatgcccct
ttctttgtcactcgatttcgggaggctctcttccactactcttccttgtatgatgcattt
gatattaatataccccgtgacaatgaagagaggttgaggtttgagagtgagttctatggc
agggaagctatgaatgtaatagcatgtgagggcgtagagcgggttgagaggcctgagaca
tataagcagtggcaggttcgatgcatgagggctggtttacagccgttgcaattggaccaa
gatttagtgaagattcttaaggataaggtgaaggcatggtaccacaaagattttgtagtt
gatcaagatagtgattggatgcttcaaggatggaagggccgaattgtgtatgcttcttct
tgttgggtgccagcgtag
DBGET
integrated database retrieval system
