Malus domestica (apple): 103422773
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Entry
103422773 CDS
T03194
Name
(RefSeq) putative tRNA pseudouridine synthase isoform X2
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
103422773
Enzymes [BR:
mdm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
103422773
Transfer RNA biogenesis [BR:
mdm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103422773
Prokaryotic type
103422773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
103422773
NCBI-ProteinID:
XP_028943993
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All DBs
Position
11:complement(join(5116077..5116523,5116698..5117165,5117287..5117431,5117625..5117773,5117886..5117998,5118426..5118461,5118591..5118825))
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AA seq
530 aa
AA seq
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MAVSSLRHPFSLCLPKFPFRTFHFSKPILPLRLNLVYCCSSSSLCTPEQTSTRSGHKWQP
VRKRKVVLRVGYVGTEYRGLQMQRDENSLSTIEKELETAIYNAGGIRESNLGNLNKIAWA
RSSRTDKGVHSLATMISLKMEIPENAWVGDPFGMDLVNHINSYLPRNIKVFSILPAQRSF
DPRKECNLRMYSYLLPAEVIGIKSHLNADEIDYHISDFNNIIKAFEGEHPFHNYTIRSKY
RSKYPAKQSPKYGKVSIAGRSTREATASESESESEESGGEENFDETYASESNAEELNQNS
SFSSNSEDSLLDACKKQGDVLKVQSAGSVIRARWLFEPDERDRIGASHFRKIFQCSCGKL
EKSLGHDYVEVSIWGESFMLHQIRKMVGTAVAIKRELLPRDILTLSLAKFSRIVLPLAPS
EVLFLRGNRFSIRVKNVTRPEMTTMVESEEINKAVDEFFISVMLPQVTKFLDPSGYPWNE
WVENLDRNTGIPDAELDEVRNAWKVWKEKFDGFASVRNQRDKVDADDCTG
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctcctcactgcgacaccccttctccctctgcctcccaaagttcccatttcgc
accttccatttttcaaagccaattttacccctcagactcaaccttgtttactgctgctcc
tcctcctccctctgtacacccgaacaaacatcaacccgctccggtcacaaatggcagccc
gtccgaaagaggaaagtggttctccgggtcgggtacgtcggcacagagtaccgaggcttg
caaatgcaacgagacgaaaattcattatccactattgagaaagagttggaaactgccata
tataacgcgggcggtatccgtgagagcaatctggggaaccttaacaagattgcgtgggcc
aggagtagccggactgataaaggagttcactctttagcgacgatgatatcattgaaaatg
gaaatcccagagaatgcatgggtcggagacccttttggcatggatcttgtgaatcacatt
aactcttatctgcctcgtaatatcaaagttttcagcattttgcctgcgcagaggagcttt
gatcctagaaaggagtgtaatctccgcatgtattcatacctccttcctgctgaagttatt
ggaatcaaaagtcatctcaacgcagatgaaattgattatcacatctcagacttcaataat
ataataaaagcttttgagggagaacatccttttcataattatactatacgatctaaatac
aggtcgaagtatcctgcaaaacaatcacccaaatatggaaaagtgtcgatagcaggtaga
tcaaccagagaggcaacagcctctgagtctgagtctgagtctgaggaaagtggcggggaa
gaaaattttgatgaaacatatgcatcagaatcaaatgctgaggaactgaaccaaaattct
tcgttttctagcaatagtgaggacagcttactcgatgcttgcaagaagcagggagatgtt
ctaaaggttcaaagtgctggttcggtcatccgtgcaagatggttatttgaacctgatgaa
agagatagaattggtgcttctcatttcagaaagatttttcagtgctcttgtgggaagctg
gagaaatcgcttggacatgattatgttgaagtttccatatggggagagtctttcatgtta
catcaaatccgcaaaatggttggaactgctgtggctataaagcgcgagttactccctaga
gatattttgacattgtcactggccaagttttcccggattgtcctaccacttgccccatct
gaagttttgtttttaagagggaacaggttttcaattagagtaaaaaatgtaacaaggcct
gaaatgacgacaatggttgaatcagaagaaataaataaggcggttgacgagttcttcata
tctgttatgttgcctcaagttacaaagttcttagatccttcaggatatccttggaatgaa
tgggttgagaatttggatagaaacaccggcattccagatgcagaattggatgaagtcagg
aacgcttggaaagtgtggaaggaaaagtttgatggttttgcatcagtccgaaaccaaaga
gacaaggtagatgccgatgattgcactggataa
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