Malus domestica (apple): 103423407
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Entry
103423407 CDS
T03194
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103423407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103423407
Spliceosome [BR:
mdm03041
]
Common components
Common spliceosomal components
SR proteins
103423407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
SLU7_N
zf-CCHC_5
zf-CCHC_3
DUF8363
RRM_5
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
103423407
NCBI-ProteinID:
XP_008359700
LinkDB
All DBs
Position
12:complement(join(19599475..19599886,19600224..19600310,19600423..19600610,19600869..19600964,19601094..19601133,19601691..19601797))
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AA seq
309 aa
AA seq
DB search
MPRYDDRYGNTRLYVGRLSSRTRSRDLERLFNRYGRVRDVDMKREFAFVDFSDPRDADDA
RYSLDGREFDGSRLIVEFAKGAPRGSREYLGRGPTPGSGRCFNCGIDGHWARDCKAGDWK
NKCYRCGERGHIERQCKNSPKELSRGRSRSPVGSRSRRGRSRSPSYSRSRSYSRSRSPAR
RGRSEDRYDRSRSPSYRKSPLPSKGGRKRSLTPDVDSPRGRRSPSPRNGRMEMEKEGSDY
SPRVRSRSPVSPRLRSRSPVSPGRDSPVVRKYPSPSEADGRGRSPSPDRSPVADYDDDNR
RTPRGSESP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttatgatgatcgatatggcaacacccgtctttatgttggtcggttgtcttca
cgcacgcgttcacgtgatctagaacggctgttcaacagatatggaagagtacgtgatgtg
gacatgaagcgggagtttgcttttgttgactttagtgatcctcgagatgctgatgatgca
agatatagcttagatggtcgggaatttgatggaagtcgtctcattgtggaatttgcaaaa
ggggcaccacgtggttcgcgggaatatttaggcagaggtcctactcctggatctggacgt
tgctttaattgtggcattgacggccactgggctcgtgattgcaaggctggggactggaag
aataagtgctatcgctgtggagaaagaggccatattgaaaggcagtgcaaaaatagtcca
aaggaattaagtcgcgggcggagtcgctcaccagttggatcacgttctcgccgtggaaga
agccgtagcccaagttacagccgaagccgcagctatagccgttcaaggtccccagcaagg
agagggcgaagtgaggatcgctatgacagatcacggagcccttcttacaggaagagtcca
ctgccctcaaaaggagggaggaagcgcagcctgacacctgatgtagacagtcctcgtggg
agacgtagcccttcccccagaaatggtagaatggaaatggagaaagagggctctgattac
agccccagggtaagaagtagaagtccggttagccccaggttaaggagcagaagtcctgtt
agccctggtagagacagccctgttgtcaggaagtatccaagcccttctgaagccgatggt
cgcggtcgcagtcccagtcccgatcggagccccgtcgctgattatgatgatgacaaccgt
cgcactcccagaggcagcgagtcaccatag
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integrated database retrieval system
