KEGG   Malus domestica (apple): 103423599
Entry
103423599         CDS       T03194                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like isoform X1
  KO
K17600  vacuolar protein sorting-associated protein 54
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mdm01009]
    103423599
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103423599
Protein phosphatases and associated proteins [BR:mdm01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103423599
Membrane trafficking [BR:mdm04131]
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    103423599
SSDB
Motif
Pfam: Vps54 Vps54_N
Other DBs
NCBI-GeneID: 103423599
NCBI-ProteinID: XP_008359911
LinkDB
Position
12:complement(join(31099820..31099955,31100066..31100146,31100294..31100361,31100488..31100649,31100840..31100919,31101027..31101108,31101408..31101561,31101793..31102208,31102305..31102388,31102512..31102683,31102921..31103177,31103863..31103951,31104131..31104284,31104426..31104503,31105053..31105176,31105579..31105658,31105776..31105838,31106395..31107198))
AA seq 1027 aa
MNRNHNYKNSSNASNKEMVIMDARPGKLNSRSNSISDPNTSQSLASILNNPNASDASSWV
GWWSSSASVSPPEFAPLVPKSASDSVTRSDFQPYLASVSDHYNRFADILNHVKKEKSDVD
SIGGQGEALVACLREVPALYFKEDFALEDGATFRSACPFTNVSENLVLQEKLSHYLDVVE
LHLVKEISLRSNSFFEAQGQLQDLNVKIVEGCSRIRELKETILLLDVDLVDCARQIHDLN
ETRSNLLALQQKLRLILYVNQALSALKLLVASADCAGALDVTDDLQHLLDGDELTGLHCF
HHLRDRVAASIESINSILSAEFMRASIHDAGDTDVIIISRVKARASSLMNGEGEDGEQIK
LDDEETSNFQDRLLPVIIGLLRTAKLPSVLRLYRDQLTADMKTAIKNAVAELLPILVSRP
LESDFTPGERVDADGFGASLASKLRSLSSESFIQLLSAIFLIVRAHLMRAAEVKKAIEWI
MCNLDGHYAANSVAAAIAVGAAAAETAQEGDGQGGLLMPYSPHRVATKALSIQGKANDAT
SPSNISKNFRADVLRENTEAVVAACDAAHGRWAKLLGVRALLHPRLRLQEFLSIYNITQD
FITATEKIGGRPGFSIRGTIQSQAKAFMDFQHESRMAKIKAVLDQETWVEVDVPDEFQII
VTSLFSSESLVSQNLDAVQDNTETSYNEVATSSNSSHAAETESSVAEQQSKGADSSETSA
DVTVKETPKSDGTEKNKADVANSVAQNNHSNKERGKSTSQSLFYKGVGFHMVNCGLILMK
MLSEYIDMNNFFPTLSSEVVHRIVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALA
SQVISFTYAIIPEIRQILFQKVPETRKALLLSEIDRVAQDYKVHRDEIHTKLVQIMRERL
LVHLRGLPQIVESWNRPEEADPQPSQFARSLTKEVGYLQRVLTRTLHEVDVQAIFRQVIL
VFHSQISEAFSRLEISTPQAKDRLRRDVKHILGCIRCLPSDKMSESSIPNWGQLDEFLVQ
RFGEEAS
NT seq 3084 nt   +upstreamnt  +downstreamnt
atgaaccggaaccacaattacaagaacagcagcaatgcctccaacaaagagatggtaatc
atggacgcccgacccggaaagttgaacagccgatccaattccatatccgacccgaacacc
agccaaagcctcgcctccatcctcaacaaccccaatgcctccgacgcctcctcctgggtc
ggctggtggtcctcctccgcctccgtctccccgcccgaattcgctcctctcgtgcctaaa
tcggcatcggactccgtgacccgatccgacttccagccttacctcgcctccgtctccgat
cactacaaccgcttcgcggacatcctcaaccacgtcaagaaggagaaatccgacgtcgac
tccatcggcggccaaggagaagccctcgtcgcgtgcctccgggaagtcccggcgctctat
ttcaaggaggacttcgccctggaagacggcgccacgttccgttcggcgtgcccgttcacg
aacgtctccgagaacctggtgctgcaggagaagctgtcgcattacttggacgtggtggag
cttcacttggtgaaggagatctcgctgcgttccaactccttctttgaggcccaggggcag
ttgcaggacttgaacgtcaagatcgtcgagggatgcagtcggattcgagagctcaaggag
acaattttgctcttggatgtcgatttggtcgactgcgcaaggcagattcatgatctgaat
gaaaccaggagcaatttgttggctctgcagcagaaattgaggctcattttatacgtcaat
caagctctttcggcacttaaactccttgttgcctctgcagattgtgctggagccttggac
gtcacagatgatttacagcatttgctggatggggatgagcttactggtctacattgcttt
catcacctccgggatcgtgtagctgcttcaattgaatcgataaatagcattctttctgca
gagtttatgcgtgcttcaatacacgatgccggagatacagatgttataattatatccaga
gtgaaagcaagggcatctagtctcatgaatggagaaggagaagatggtgaacagattaag
ttggatgatgaagaaacctccaattttcaagatcgtcttcttcctgtcatcattggattg
cttagaactgccaagctcccttctgtgttgaggttatatcgtgaccaacttacagctgac
atgaagactgctattaaaaatgcggttgcagagctgcttcccattcttgtttcacgacca
ctggagtcagattttacacctggagagcgagttgatgcagatggttttggcgcatcactt
gcgagcaagttgaggagcctgtcatctgagagctttattcaacttttaagtgctattttt
ctaattgtaagggcacatctaatgcgggctgctgaagtgaagaaggccattgaatggatt
atgtgcaaccttgatggtcactatgcagccaattcagttgctgcagcgattgcagttggt
gctgcggctgcagaaacagctcaagagggtgatggtcaaggtggcttgcttatgccatat
tcaccccatagggttgctacaaaggcactttcaattcaagggaaagctaatgatgcaaca
agtccttcaaacatctctaagaattttagagctgatgtgttacgagaaaacacagaagct
gttgttgcagcatgtgatgctgctcatggaagatgggcaaaactactcggtgttcgtgct
cttcttcatccaaggttgagattgcaggagtttttgagcatatataacatcacccaagac
tttataacagctacagagaagatagggggaaggccgggatttagcatcaggggaacaata
cagtcacaggccaaagcctttatggattttcagcatgaatctcgtatggcaaaaattaag
gcagttcttgaccaagaaacttgggtggaagtggatgttcctgatgaatttcagatcatt
gtcacttcactatttagttctgaatcattggtttcccagaacctggatgctgtccaagat
aatacggaaacaagttacaatgaggtggccacaagcagtaatagttcacatgcagcagaa
acggaatcatcagttgctgaacagcaatctaaaggggcggattctagtgaaacatctgcg
gatgttactgtaaaggagacaccaaagtctgatggaactgagaaaaataaagctgatgtt
gcaaattctgttgctcaaaataaccatagcaataaggagcgaggaaaatcaacctctcaa
agccttttctacaaaggtgttggttttcacatggtaaactgtggcttgatattgatgaag
atgttgtcagaatacattgatatgaacaactttttcccaacactgtcctcagaagttgtt
catcgtattgtagaaattttaaaatttttcaatacaagaacgtgtcagcttgttcttggt
gctggtgccatgcaggtatccggtttaaagtctattacttctaaacacttggccttggca
agtcaagtcatcagttttacgtatgctattattcctgaaatcaggcaaattctttttcaa
aaagtgccagagacaagaaaggcattgctgctatcagaaattgatcgagtagctcaggat
tataaggttcacagagatgaaatacacaccaagctagttcaaatcatgagagaaaggtta
ttggttcatctacgcgggttgccccaaattgtagagagctggaatagacctgaagaggct
gatccacagcctagccagtttgctcgatcccttaccaaggaagttggatacttacaacgt
gttttaactcgaactttacatgaggttgatgtccaagcgattttcaggcaagtaattttg
gtcttccattcacaaatatcagaagcattttcacggttagagatcagcacaccacaagcc
aaggacaggctgcgccgggatgtcaaacacattcttggctgcattcgatgtttaccttcg
gataaaatgagcgaatctagtattccaaactggggtcagctagatgaatttttggtgcag
agatttggcgaggaagccagttaa

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