Malus domestica (apple): 103423714
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Entry
103423714 CDS
T03194
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32-like
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdm03009
]
103423714
Enzymes [BR:
mdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103423714
Ribosome biogenesis [BR:
mdm03009
]
Eukaryotic type
90S particles
Helicases
103423714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
103423714
NCBI-ProteinID:
XP_028947227
LinkDB
All DBs
Position
13:complement(join(641090..641430,641622..641776,642060..642484,642614..642769,642877..643068,643604..644200,644776..645144))
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AA seq
744 aa
AA seq
DB search
MRKPKSKCSRKQKDLSELQEIELLNSWIESQKPDCGSNPMSLPALPSDAPVGRPGDTLFS
PYAGGTRFEQLPVSKKTKDALRQCKYVEMTDIQRASLPHALCGRDILGAAKTGSGKTLAF
VIPLVEKLYRERWGPQDGVGSIIISPTREIADQTFDVLKLVGRHHNFSAGLLIGGRKVEE
EKEHVNDLNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKDTLNAIISQL
PKKRQTFLFSATQTKSVKDLARLSLKDPEYLSVHEKAVTATPTLLQQAAVIVSLDKKLDV
LWSFIKTHLNYRILVFLSTRKQVKFVYEAFKKLRPGIPLKCLHGKMKQEGRMGTYSQFSE
KRCVLFSTDVASRGLDFNKAVDWVVQVDCPDDVASYIHRVGRTARYQSKGQSLLFLMPSE
VKMLEKLKEAKIPIKSTQANPDKLQPVSGLLASLLVKYPDPLQGLAKRAFITYVKSIQKQ
KDKEIFDVTNLPVEEFSASLGLPMTPKIRFANQKIKSKKVPELFPLVEPESWDKEDRLEL
PKEELDIGDFMEEDGEEDALVRNATANEAEGEGRKIEDIIPATRVSKKKKLKINIHRPVG
TRVVFDEEGNTLPPLARLADINTSGLPDEIHDMKNDYYKKLREDMKVVDKEDKVLDRQRR
REKRLKHKMKLKRGNTEEDSEDNLSDSEGEPAEDRPRKKSKIYFGSDDEGEREESKKKLG
FTADSMSLEEQEALALKLLNSMHS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacccaaatcgaagtgctcccgcaagcaaaaggacctctcggagctccaggaa
atcgagcttctgaattcatggattgaatcccagaaacccgattgtggctccaaccccatg
tctctccccgccttgccctccgacgcccccgtcggccgtcccggtgacaccttattttct
ccctacgccggcggcaccagattcgagcagctgcccgtctctaagaagacaaaggacgcc
ctgcgccagtgcaagtacgttgaaatgacagatattcagagggcttctttgccccatgcg
ctgtgtggcagagatattctcggcgccgccaagaccgggtcgggaaagactttggctttt
gttattccgcttgtggaaaaattgtatagagaaagatggggacctcaggatggggtaggc
agcatcataatatctccaacaagggagatagctgaccaaacttttgatgtgttaaaattg
gttgggaggcaccataactttagtgctggtcttctaattggtggtcgcaaagttgaagaa
gagaaggagcacgtaaatgacctgaacatactggtttgcactccaggacggcttcttcag
cacatggatgaaaccccaaattttgattgctcacaacttcaggttttggtccttgatgag
gcagatcgtattcttgatgtcggatttaaggacacactgaatgcaatcatttcacagcta
cctaaaaaaagacaaacgtttctcttctcagcaactcaaacaaagtcggttaaagatctt
gcaagactcagtttgaaggatccagaatatctcagtgtgcatgagaaggctgtgacagcg
actcctactcttttgcagcaggcggcagtcatcgtttcacttgacaaaaaattagacgtg
ttgtggagcttcataaagacacatctaaattatagaattctagtgtttctatcaacccgc
aaacaggtaaagtttgtctatgaagcatttaaaaagctccgtcctggaatacccttgaag
tgtcttcatggtaagatgaagcaagagggacgaatgggaacgtactcacagttttctgaa
aaacgttgtgttctcttctcaactgatgtggcttcaagaggccttgatttcaacaaggca
gttgactgggttgttcaggtggactgcccagacgatgttgcatcttacatacacagagtt
ggacgaactgctcgttatcaatctaaagggcaatcacttttatttctgatgccttcagaa
gtaaaaatgcttgagaaattgaaggaggcaaaaatacctattaagtccacccaggctaac
ccggataaactgcaaccagtgtctgggttgttagcatctttgctagtcaagtacccagat
ccacttcagggtctagctaaaagggcatttatcacgtacgtgaaatctattcaaaagcag
aaggacaaagagatttttgatgttacgaatttaccagttgaagaattttcagcatcactg
ggtctaccaatgactcctaaaattcgttttgcaaaccagaaaatcaagtcgaagaaagtg
cctgaattatttccccttgttgaaccagaaagttgggacaaggaggataggttggagctt
ccaaaagaggagctcgatattggtgattttatggaagaggacggggaggaagatgctctt
gtaagaaatgctactgcaaatgaggcagagggggaaggacgaaaaatcgaagatattata
ccggctactcgggtttcgaagaaaaagaagttaaagatcaatatccataggccagtgggg
actagagtcgtctttgatgaggaaggcaacacgctacctccattagcaaggctggctgat
atcaataccagtggtctgcctgatgaaattcatgacatgaaaaatgactattacaagaag
cttagggaagatatgaaggtggtggacaaggaagacaaggttctagaccgccagcgtcgg
cgtgagaaacgtttgaagcataagatgaagttgaagagaggaaacacagaagaagattcg
gaggataatctttctgattcagaaggagaaccagctgaggatcgaccccgcaaaaagtcg
aagatatactttggtagtgatgatgaaggtgagagagaagaaagtaagaagaaactgggt
ttcactgctgactcaatgtctttagaggaacaagaagctttggctctcaaattattaaat
tccatgcactcataa
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