Malus domestica (apple): 103423830
Help
Entry
103423830 CDS
T03194
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103423830
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
103423830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Pan3_PK
Motif
Other DBs
NCBI-GeneID:
103423830
NCBI-ProteinID:
XP_028952007
LinkDB
All DBs
Position
16:complement(1489285..1498363)
Genome browser
AA seq
1598 aa
AA seq
DB search
MDQNQRPSSSASAATRAYQFHPARAAIVNLFDLYLGRSSRQKPDDSVREPPNKSQKRVLA
LNRELPPRNEQFLLDFEQLQSQFPDQDQLRVVTESVLISLVVQCSNHAPRAEFLLFALRS
LCTIGHINWDTFLPSLLSSVSTAEMSVGQGSQAMPAISPQSGMLPSSNAIPNSSNFQSST
PASPLPSVHGIGSPSQSAIEPSSMSPVKSSDVASNGQQATARFNSSIRDNAISSLRQLCC
KIILTGLAFNLKPVTHANIFSHMLNWLVNWDQKQLGVDEPDGVRSWRPGKALIEWLHSCL
DVIWLLVDEDKCRVPFYELLRSGLQFMENIPDDEALFTLILEIHRRRDMMAMHMKMLDQH
LHCPTFGTHRIFTQTTPSVSGEAVASLRYSPITYPSVLGEPLHGEELATSIPKGSLDWER
ALRCIRHALCTTPSPDWWKRVLLVAPCYRSPSQGPTPGAVFISEMICEATIDRIVELLKL
TNSDINCWQEWLVFSDIFFFLIKSGCIDFVDFVDKLVSRLTEGDQQILRTNHVTWLLAQI
IRVELVMNALNQDARKVETTRKILSFHKEDRSSDPNSPQSILLDFISSCQNLRIWSLNTT
TREYLNNEQLQKGKQIDEWWRTASKGDRIMDYMNMDERSIGMFWVVSYTMAQPACETVIN
WLSSAGVAESLPGTNLQSNERLMVMQEVSPLPMSLLSGFSMNLCLKLAYQMEESLFSGQV
VPSIAMAETYCRLLLIAPHSLFRSHFNHLAQRNPSVLSKPGVTLLVLEILNYRLLPLYRY
QGKSKALMYDVTKIVSALKSKRGDHRVFRLAENLCMNLILSLRDFFFVKREGKGPTEFTE
TLNRVTIVTLAIIIKTRGIADADHLLYLQTMLEQILATSNHTWSEKTLRYFPSLLRDFLI
QRIDKRGLAIQEWQQAETTVINQCTQLLSPSADPTYVMTYISHSFPQHRQYLCAGAWILM
QGHPENINSLNLARVLREFSPEEVTSNIYTMVDVLLHHIQLELQHGHSLQDLLLKACANL
AFYIWTHELIPLDILLLALIDRDDDPHALHIVMSLLDRQELQQRVKQYCSNRGPPEHWLV
STSFKRVELQKALGNHLSWKDRYPTFFDDIAGRLIPVIPLIIYRLIENDAIDSADRILVM
YSPFLKYHPLRFTFVRDILAYFYGHLPGKLIVRILNVLEVNKIPFSESFPVHMNNAMCPP
ADYFATLLLGLVNNVIPPLHNNSKSGTSDALNNSMRAPPNKTPPPSQSGQANVSDGQKAF
YQIQDPGTYTQLVLETAVIELLSLPVSASQIVSSLVQIVVNIQPTLIQSSNGLHGAPSGV
GQGSVLPTSPSGGSTDSLGTSRSPASVSGINASNFVSRSGYTCQQLSCLLIQACGLLLAQ
LPPDFHVQLYLEASRIIKETWWLTDGKRSMGELDSAVGYALLDPTWAAQDNTSTAIGNIV
ALLHSFFSNLPQEWLEGTHLIIKHLRPVTSVAMLRIAFRIMGPLLPKLANAHALFSKTLS
LILSMMVDVFGKNVQPPTPVEPLEIADLIDFFHHVVHYEGQGGPVQANSKPRPEVLALCG
RAAESLRPDIQHLLSHLKPDTNSSIYAATHPKLNQNSS
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaaccagcgaccatcgtcctcggcgtcagctgccacgcgagcttaccagttc
caccccgcacgtgccgcaattgtcaatctcttcgatctctacttaggaagaagtagccgc
caaaaacctgatgattcagttcgagagcctccgaacaagtcacagaagcgtgtacttgct
cttaatcgagagcttccacctcgaaacgagcagttcctactagattttgaacaactgcag
agccagtttcctgaccaagatcaactgcgcgtcgtgacagaatctgtacttatatctcta
gttgtgcaatgtagtaatcatgcgccacgggcggagtttcttctctttgctctaaggagc
ttgtgtactataggtcacattaactgggatacttttttgccgtcccttctttcttcggtt
tccacagcagaaatgtcagttggtcaagggagtcaggcaatgcctgctatttcaccgcag
tctggtatgcttccatcttcgaatgcaatccccaattcttctaattttcaatcttcaact
cccgcctctccattaccttcagtgcatggcattggttcccccagccagtctgctatcgaa
ccatcatctatgtcaccagttaaatcatctgatgtagcctccaatggacagcaagctacg
gcaaggttcaattcatctataagagataatgccataagcagtcttcgtcagctgtgctgc
aagatcattttaactggacttgcatttaatttaaaaccagttactcatgctaacatcttt
tcccatatgcttaattggctggttaattgggaccaaaaacaacttggggttgatgaacct
gatggtgtaagatcctggagacctggaaaggcgctaattgaatggctacatagctgtttg
gatgtgatttggcttttggttgacgaggataaatgccgagtgcccttctatgaattactg
cggagtgggttgcaatttatggagaatatacctgatgatgaagccttatttactctaatc
ttggagatccataggaggcgagatatgatggccatgcacatgaaaatgttagatcaacac
ctacattgccctacatttgggactcatcggattttcacacagacaactcctagtgtttca
ggagaagcagtagcgagcttgaggtattcaccaatcacatatccaagtgttctgggagaa
ccattgcatggagaggaacttgcaacttcaattccaaaaggaagtttggattgggagaga
gctctgcgttgcataaggcatgctctatgtactactccgtcacctgactggtggaaacgg
gtgctgcttgttgccccttgctacaggtctccttctcaagggcctactcctggtgctgtt
ttcatctctgaaatgatttgcgaggcaacaattgatagaattgttgagctattaaagttg
accaattcagatattaattgctggcaagagtggcttgtcttttcggatatattctttttt
cttattaaaagtggctgtattgattttgttgattttgtggacaagctagtttcacgcctt
accgagggtgaccaacaaattcttaggacaaatcacgtcacttggcttcttgctcaaatt
atacgggttgaacttgtgatgaatgctctaaatcaagatgctagaaaggtggagacaaca
cgtaagatcctatcgtttcataaagaagataggagctcagatccaaatagtcctcaaagt
atcctgctggacttcataagcagttgccagaatttacgtatttggtcgttgaacacaaca
actagagaatatctgaataacgagcagcttcagaaaggaaagcaaatagatgaatggtgg
aggacagcaagcaaaggggatcgaataatggattatatgaatatggatgaaaggtcaatt
gggatgttttgggttgtgtcttacaccatggcgcagccagcttgtgaaactgtgataaat
tggttatcctctgctggagttgcagagtcattaccgggaacaaacctacagtccaatgag
aggttaatggttatgcaggaagtatctccactgccgatgtccttgttatctggcttttca
atgaacctatgtttaaagctggcgtatcaaatggaagaatctttattttctgggcaggtt
gtacctagtattgcaatggctgaaacatattgtaggctgctactcattgcacctcactca
ttatttcgttctcatttcaatcatttggcgcaaaggaatccctcagtattgagcaagcca
ggtgtaactcttttagtgcttgaaattttgaattaccgtttgcttccactttacaggtac
caaggaaaaagcaaagccttgatgtatgatgttacaaaaatagtttctgctctaaaatca
aaacgtggagaccatcgtgtatttaggttggctgagaacttgtgtatgaatcttattctg
tctttgagagactttttctttgtgaaaagggaagggaagggtccaactgaattcacagaa
actttgaatcgagtaactattgtcactcttgcgatcatcattaagacacgaggaattgct
gatgctgatcatctgctttatcttcaaaccatgttagagcagatattagccactagtaat
cacacatggtcagagaaaacactacgctatttcccttctcttcttcgtgattttttgatt
caacggattgataaaaggggcctggcaattcaagaatggcagcaggcggaaaccactgta
attaaccaatgcacccagcttttgtcaccttccgctgatcctacatatgtaatgacctat
atcagtcatagttttcctcaacaccggcaatatctatgtgctggtgcatggattctgatg
caagggcacccagaaaacatcaacagcctaaacttagcacgcgtcttgagagagttttct
cctgaggaagtaacatctaatatctatacaatggtggatgttctgcttcatcatattcag
ttggaactgcagcacggccattctttgcaggaccttttattgaaagcatgtgcaaaccta
gcattttatatttggacccatgagttgatccctttggatattttgctcctggcactgatt
gatcgtgacgatgacccccatgctctgcatatcgtgatgagtctacttgataggcaagaa
cttcaacaaagggtgaaacaatattgttcgaatcgaggtccccctgaacactggcttgtc
tctacatcctttaagcgagttgaattgcagaaggccctcgggaatcatctatcttggaag
gacaggtatcccaccttcttcgatgatattgcagggcgtttgatcccagtcattccattg
ataatttatagactaattgaaaatgatgccatagattcagctgacagaattctggtcatg
tattctccatttcttaaataccaccctttaagatttacttttgttcgtgacatacttgca
tatttttatggccatcttcccggaaagcttattgtccgaatattgaatgtactcgaagtc
aacaagatcccattttctgagtcattcccggtgcatatgaataatgccatgtgcccacct
gccgattactttgcaactctcttactgggactagtgaataatgtcattcccccattgcat
aacaactcaaaatctggaacgagtgatgctttaaataattcaatgcgtgccccacctaac
aagactccaccaccttctcagtctgggcaagcaaatgtttccgatggccaaaaagcattc
taccaaattcaggatccaggcacatatactcagctggttcttgaaacagcagtaattgaa
ttgctctctcttcctgtatctgcatcccagattgtatcatcacttgttcagattgtcgtc
aatatacaaccaacattaattcaatccagcaatggcctgcacggagctccaagtggtgtt
gggcaaggctccgttttaccaacatccccttcgggcggaagcacagattccttgggcacg
agcaggtcacctgcttcagtatcaggaataaatgcatctaactttgtttctcgaagtggt
tatacatgccaacaattgtcttgcttattgatccaagcatgtggtctactactggctcag
ctgcctcctgattttcatgtgcaactctatctggaggcgtcgcgtataataaaagaaacg
tggtggctcactgatggcaaacggtcaatgggggaactggactctgctgtcggttatgct
ttgttggatccaacatgggctgctcaagacaatacctcaaccgccattggtaatattgtt
gcgctgcttcattcgtttttcagtaacctcccacaggaatggctagaagggacccatctt
atcatcaaacatctcaggccagtgacttcagttgcaatgttgagaatagcattccgcatc
atgggtccgttgctccctaaactagccaatgcgcacgccctcttcagtaagaccctgtca
ttgattttaagtatgatggtggatgtctttggtaagaacgtacagccaccgactcctgtt
gagccattagaaatagcagatcttattgacttcttccatcatgtggtccattacgaaggg
cagggaggtccggtgcaagctaacagcaagcccagaccagaggttttagctctctgtgga
agagctgcagaaagtctgcgtccggacatacaacaccttctttcccacttaaaacccgac
acgaattcttccatctatgctgctacgcatcccaagttgaaccagaattcatcgtaa
DBGET
integrated database retrieval system
