KEGG   Malus domestica (apple): 103423832
Entry
103423832         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K23288  syndetin
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103423832
Membrane trafficking [BR:mdm04131]
 Protein recycling
  Others
   EARP complex
    103423832
SSDB
Motif
Pfam: Vps54_N Syndetin_C TetR_C_30
Other DBs
NCBI-GeneID: 103423832
NCBI-ProteinID: XP_028955687
LinkDB
Position
03:complement(join(12300229..12300330,12300423..12300473,12300638..12300715,12300815..12300934,12301752..12301824,12302024..12302086,12302396..12302466,12303046..12303171,12303637..12303791,12303910..12304012,12304122..12304185,12304302..12304828,12305353..12305913,12306418..12306550,12306642..12306670,12308412..12308531,12309690..12309773,12310375..12310461,12310567..12310656,12310809..12310898,12311033..12311097,12311635..12311713,12312591..12312665,12313635..12313802,12314216..12314464))
AA seq 1120 aa
MISEVRIEMRPNLSPFGSVLANPFVFNGDLSEGFESPGVLFLVPVLLFQGGAMDLSKVGE
KILSSVRSATSLGLLPSASDRPEVPARAAAAAAVARAIAGLPPHQRFSLSSSSEELISIY
GSRHHSQEVEEIEEEFYEEDLDPVRHILEHIPYEESELAYFERQATLRLAQLDRVAERLS
RNVMEHHEVMVKGMHLVRELEKDLKVANVICMNGRRHLTSSRNEVSRNLIVNSNSKKKQA
LLDMLPVLTELGHALKMQAELEFLVEEGNYCKAFQVLSEYLQLLDSFSELSAVQEMSHGV
EVWLGKTLQKLDSLLIGVCQEFNEEGYITVVDAYALIGDISGLAEKIQSFFMQEVLSETH
SILKNIVQEDQGFQMQNSRLTYSDLCLQIPEPKFRQCLLNTLAILFKLMCSYHEIMGFQM
DNRDSARKTPSMTQKESDVSPTPGGVQQISPPCSSQKVNGSLVESVDIVPGSAYIDDPTT
TCSVVESTGNTTSTSYQNLVDEASKDDSTTSTSGSPWYQLRKDATAFVSQTLQRGRKNLL
QLTTTRVSVLLSSTSVSSASIHQFLKNYEDLGVFILAGEAFCGFEAADFRQKLKAVCENY
FVAFHRQNIYALKMVLEREIWLIMPPDTVQEITFPELAGDGAPIIVSFEGKSNARVLHSK
STSVVDTGTKKSGFSNWLRNGNPFLLKLAHTSEGGLKWNGTTGEFDGNFSQRLGDKVSPP
SSDSRHSNGANSVSEEENEDLLADFIDEDSQLPSRILKPRLSRNQSLHCNDGEITAQTGS
SICLLRSMDKYARLMQKLEIVNVEFFKGICQLFEVFFHFVFETFAQQNSNSGGKGSPDPI
NYRLKTALSRIQKDCDQWIRAPSSSSTSINSSFADITPMSPPSNTPGTSFGLKERCAGAD
TISLVARILHRSKAHLQTMLLQSNATVVEEFYAHLVDAVPDLVEHIHRTTARQLLHINGY
VDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLEYGLEIVAQT
LIEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVAMNVKPHLQIVEAFIKAYYLPETEYV
HWACAHPEYTRNQIVGLINLVATMKSWKRKTRLEVLEKIE
NT seq 3363 nt   +upstreamnt  +downstreamnt
atgatctcggaggttcgaattgaaatgcggccgaatctgtctcccttcggcagcgttttg
gcgaatccgtttgtgtttaatggcgatttgagcgagggctttgagagccctggggttttg
ttcttggtcccggttttgctgttccaaggtggtgcaatggatttgtcaaaggtcggcgag
aagattctgagctccgttaggtccgccacatcgctcggccttcttccttctgcttctgat
cgtcccgaggttcctgcacgagctgcggctgctgcagctgttgctcgtgctattgctgga
ctgcctccacatcaaaggtttagtctctcatcaagctctgaagaattgatctcaatatat
ggaagcagacatcacagtcaagaagtggaggagatagaggaagaattttatgaagaggac
cttgatccagttagacatattttagagcatattccatatgaagaaagtgagctggcttat
tttgagagacaggccactcttagattggcccaactggatagagtagctgaacgtttatcc
cgcaatgttatggaacatcacgaagtaatggtgaaggggatgcatttggtcagggaattg
gagaaagacttgaaagttgcaaatgtcatctgtatgaatggaaggcggcatctgacctca
tcaaggaatgaggtttctaggaatctcattgtaaattccaattctaaaaagaaacaagct
cttctggacatgcttcctgttttaactgagcttggccatgcactgaaaatgcaagcagag
ctcgagtttctggttgaggaaggaaattactgcaaggcctttcaagtcctgtctgaatat
ttacagctgttagatagtttttcagaactttctgcagtacaagagatgagccatggtgta
gaggtttggctgggaaaaactcttcaaaagctggattccttgttgataggagtgtgccag
gagttcaacgaggagggctatataactgtggtcgatgcttatgcactaattggggatatc
tctggccttgctgagaagatacaaagtttctttatgcaggaagttctatcagaaacccac
tctatattgaagaatattgtgcaagaggatcagggatttcaaatgcaaaatagtcgactt
acctacagcgatctatgccttcagatacctgaaccaaagtttaggcagtgtttgttaaac
acactagctatccttttcaaattgatgtgttcatatcatgaaatcatgggctttcagatg
gataatagggattcagcccgtaaaactccaagcatgacacagaaggaaagtgacgtctct
cccactccaggaggggttcagcaaatttcacctccttgttcttcccaaaaagttaatggc
tctctcgtcgaatctgtagatatagtgcctggttcagcctacatagatgatcctacaact
acctgctctgtggttgaatctacaggaaacacaacttccactagttatcaaaatttagtt
gatgaggcaagtaaggatgacagtacaacatcaacaagtggatccccgtggtatcaactg
aggaaagatgccacagcatttgtttcacaaacccttcagaggggacgcaaaaatctcttg
caactcacaactactcgtgtatcggtcttgctttcttcgacttctgtttcttctgctagc
atacaccaattcttgaaaaactatgaagatctgggtgtcttcatcttggccggggaagca
ttttgcggatttgaagctgctgacttcaggcagaagttgaaggcagtatgtgaaaattat
tttgtagcttttcatcggcagaatatatatgcgcttaaaatggtgttggaaagagaaatt
tggttgataatgccaccagatacagtacaagaaattacatttcctgagcttgccggtgat
ggagcacctataattgtttcgtttgagggtaagtcgaatgccagggttctacattctaag
tctacaagtgttgttgatactggcaccaagaagagtggattctctaattggcttagaaat
ggaaacccctttttgttaaagctggcacatacatccgaaggaggtcttaaatggaatggc
acaactggtgaatttgatggtaattttagtcaaaggcttggtgataaggtctctccacca
agcagtgattcaagacattctaatggtgctaattctgtttcggaagaagaaaatgaagat
cttcttgcagactttattgatgaggatagtcaactcccaagtcgaattttgaaacctaga
ctttcaagaaatcagtctttacattgtaatgatggagaaatcacagcccaaactggatcg
tctatttgtcttctaaggtcaatggataaatatgccaggcttatgcagaaattagaaata
gtcaacgttgagttcttcaaggggatatgccagttgtttgaggtattttttcattttgtg
tttgaaacatttgctcagcaaaacagcaattcaggtggaaaagggtcacctgatccgatt
aattatcggctgaagacagccttgtccagaatacaaaaggactgtgaccagtggataagg
gccccgtcatcttcatccacatctataaattcttcatttgcagacatcactccaatgagt
cctcccagtaacacaccaggaacatcctttggtctcaaggaaagatgcgcaggtgctgac
actatctcccttgttgctcgaatattgcatagatctaaagctcatctccagacaatgcta
cttcagagtaatgctactgtagttgaagaattctatgcacatctggttgatgctgtacca
gatcttgtagagcacatccataggacaactgcaagacaactgctccatattaatggttat
gtggatcggatagccaatgcaaaatgggaagtaaaagagcttggactagagcataatggg
tatgttgatttgttattgggagaattcaagcactataaaacaaggcttgctcatggagga
atccgcaaggaggttcaagacctcctcttggaatatggacttgaaattgttgcccaaact
ctcatagaaggtctctcccgtgtcaagaggtgtacagatgaagggcgggctctcatgtca
ttggatctacaggttttgatcaatggcctgcagcattttgtggccatgaatgtgaagccc
catttacaaatagttgaagccttcattaaggcatactatctcccggaaactgaatatgtg
cactgggcatgtgctcacccggaatacacaagaaatcaaatcgttgggttgatcaacctt
gttgccacaatgaaaagttggaagagaaaaaccagattggaggtgttagaaaagattgaa
tga

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