KEGG   Malus domestica (apple): 103424191
Entry
103424191         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein
  KO
K12830  splicing factor 3B subunit 3
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103424191
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103424191
   03041 Spliceosome [BR:mdm03041]
    103424191
   03036 Chromosome and associated proteins [BR:mdm03036]
    103424191
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     103424191
Spliceosome [BR:mdm03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103424191
 Complex B
    103424191
 Complex C
   U2 SnRNP specific factors
    103424191
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     103424191
    TFTC complex
     103424191
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A
Other DBs
NCBI-GeneID: 103424191
NCBI-ProteinID: XP_008360499
LinkDB
Position
14:join(5074778..5074951,5075126..5075260,5075356..5075435,5075841..5075924,5076593..5076680,5076867..5077024,5077150..5079073,5080118..5080428,5080640..5080955,5081088..5081243,5081418..5081559,5082211..5082287,5083100..5083230,5083906..5084014,5084609..5084806)
AA seq 1360 aa
MAVSEEECSSAKSRSSSSASSSSSSHYLAKCVLRGSVVLQVLYGHIRFPTSYDVVFGKET
SIELVIIGEDGIVQSICEQPVFGTIKDISILPWNDKFCTQNPQMVGKDLLVVISDSGKLS
FLSFCNEMHRFFPVTQVQLSNPGNSRNQLGRMLAIDSSGCFIAASAYENRLAMFSVSLSG
GSDIIDKKILFPPENEVDGSAARVQKNSIHGTIWSMSFISKDPSQSSKEHSPVLAIILNR
RDAVLNELLLLGWNIRDQDIYVISTYVEDGPLAHSIVEVPHSHGFAFMFREGDALLMDLR
DAHNPFCVCRTSSNFLSNVVDEANFVQESSRGCDLSRVLQVDDEGGLFNVAACALLELSD
LDPMCIDGDKYNVNVTYKHVCSWTWELGNVKNPRMIVCADTGEYFMIEIMFGPDGPKVQE
SECLYQGSPSKALLWAEGGFLAALVDMGDGMVLKMENGMLLYTSPIQNIAPVLDMSVVDY
HDEKHDQMFACCGVAPEGSLRLIRSGISVEKLLRTAPIYQGITGTWTLRMKVIDSYHSFL
VLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGIVNDGLLVQIHKNAVRVCLPTKAA
HSEGIPLPSPVFTSWFPENMSISLGAVGHNLIVVSSSNPCFLFILGVRVLSLHQYEIYEM
QHLSLQNELSCVSIPHKRFGQTNNSLPFGVDVSNTFVIGTHKPSVEVLSYGPNEGVTILA
SGMISLTNTLGTAISGCIPQDVRLVLVDRLYVLAGLRNGMLLRFEWPAASAMPLSVLTSQ
SLVGRQIYDKLYEKTKDYYPVELQLIATRRIGITPVFLVPLSDSLDGDIVVLSDRPWLLH
TARHSISYTSISFQSSTHVTPVCYVECPKGILFVSENCLHLVEMVHSNRLNVQKFHLGGT
PREVLYHSESRLLLVMRTDLIDDTCSSDICFVDPLSGSVLSSFKLEPGETGKSMELVRVG
NEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCLEHVQNSDSGSMTFCSKAGSSSQRAS
PFHEIVGYATEQLSSSSLCSSPDDTSCDGIKLEETEAWQFRFAYSSTWSGMVLAICSYLD
RYFLASAGNAFYVCGFPNDNPQRVRKFNVARTRFMITSLTAHFTTIAVGDCRDGVLFYAY
HEDSKKLQQLYFDPCQRLVADCILMDVNTAVVSDRKGSIAVLSSADYSEDSASPECNLTV
SCAYYMGEIAMSIRKGSFSYKLPADDVLKGSDGNIDFSRNAIIVSTLLGSIITFVPISRE
EYELLEAVQDRLVVHPLTAPILGNDHNEYRGRENPAGVPKILDGDMLSQFLELTSMQQEA
VLSSPFGAQGTPKPSLKSRHVPIPVNQVVQLLERVHYALN
NT seq 4083 nt   +upstreamnt  +downstreamnt
atggctgtctcagaggaagagtgttcctccgccaagtcccgatcgtcgtcgtcggcctcc
tcctccagcagttctcactacctcgccaagtgcgtcctccgcggaagcgtcgtacttcag
gtcctctacggtcacatccgcttccccacctcttacgacgtcgtcttcggcaaggagact
tcaatagagttggtaataattggggaagatggaattgtacaatctatatgtgagcagcct
gtgtttggtaccattaaagacatttccattctaccctggaatgacaaattctgcacgcaa
aacccgcagatggtgggtaaagaccttttggttgttatttctgattccgggaagctctcg
tttctctcgttttgcaatgaaatgcacaggttttttcctgtgacacaagttcaactttct
aatcctggaaattcaaggaatcagcttggaagaatgctagcaatcgattcaagtggctgt
ttcattgctgctagtgcttatgaaaaccgtttggctatgttctctgtttcattgtctgga
ggcagcgacattattgataagaaaatactatttcccccagaaaatgaagtagatgggagt
gctgccagagtccagaaaaacagtattcacggtactatatggagcatgagctttatttca
aaggatcctagtcaatcaagtaaggagcatagtcctgtacttgccattattctaaatagg
agagatgcagtccttaatgaattgctgttactgggatggaatattagggatcaggatata
tatgttatttctacatacgttgaagatggaccattagcacatagtattgttgaagttcct
cattctcatggatttgcttttatgtttagggagggtgatgctctcctaatggatcttaga
gatgcacacaaccccttctgtgtctgtagaacaagctcaaatttcttatccaatgtggtt
gatgaggcaaattttgttcaagagtcatctagaggatgtgatctgtctagagtacttcag
gttgatgatgaaggaggtttattcaatgtagctgcttgtgctttactagaactgagcgat
ttagatccaatgtgcatagacggtgataaatacaatgtgaatgtgacttacaaacatgtg
tgttcatggacttgggaactggggaatgtaaaaaatccgagaatgatcgtttgtgcagat
acaggagaatatttcatgatagaaattatgtttggtcctgatggccccaaggttcaagaa
tctgaatgtctttaccaaggttcaccatccaaggcacttctgtgggctgaaggcgggttt
cttgctgcactagtagacatgggggatggaatggtcttgaaaatggaaaatggaatgctt
ctttacacaagtcctattcaaaatattgccccagtgttggatatgtcagttgttgattac
catgatgaaaaacatgatcaaatgtttgcctgttgtggagtggcacctgagggatcatta
aggcttattagaagtggtatcagtgtggaaaagctactaaggactgcgcctatttatcaa
ggaattactggtacttggacattacgaatgaaagtaattgattcttaccattcttttctt
gtgctatcatttgtagaggagaccagggtattatcagttggtttaagctttactgatgtg
acggattcagttggttttcagcctgatgttagtactttggcttgtggtattgtaaatgat
gggttgctggttcagattcacaaaaatgcagttagggtctgtttgcccaccaaggctgcc
cattctgaaggtattccacttccttctcctgttttcacatcttggttcccagaaaatatg
agtatcagtttgggggctgttgggcataatctcattgttgtttcttcatctaatccatgc
tttttattcattcttggggtcagagtgctttcgttacatcagtatgaaatttatgagatg
cagcatttgagcttgcaaaatgaattatcatgtgtttctattcctcataaacgttttggg
caaaccaataattctctcccatttggagtcgacgtaagtaatacctttgttattggcaca
cacaagccctcagtggaagttttgtcttatgggcctaatgaaggcgtgacaattcttgct
tctggaatgatctcattaacaaatactttaggaacagctattagtggctgcattcctcaa
gatgtaaggcttgtattagttgacagattgtatgtccttgcgggattgaggaatggaatg
ctacttcgtttcgaatggcctgctgcctctgcaatgcctctgtctgttttaaccagtcag
agtcttgttggccgacaaatatatgataagttatatgagaagacaaaggactattatcct
gttgagctgcagttgattgccactcgtcgcattggcatcactccagttttcttggttcct
ttgagtgactcgctagatggtgatatagttgttctcagtgataggccttggttgttacat
actgcaaggcacagtatctcgtacacttctatctcatttcaatcttcaacacatgtcact
cctgtatgttatgtcgaatgccctaagggaattttatttgtttcagagaactgtctacat
ttggtagagatggtgcacagcaataggcttaatgtgcagaagtttcatcttggaggcact
ccgagagaggtcctttatcatagtgaaagcaggctattgcttgtgatgaggactgatttg
attgatgatacatgctcatcagatatatgtttcgttgatcctctaagtgggtctgtgctg
tcatccttcaaacttgaacctggtgaaacaggaaaatcaatggagttagtgagggttgga
aatgaacaagttcttgtggttgggacgagcttatcttctggtccagccataatgcccagt
ggtgaggctgagagtaccaagggccgtcttattgttctttgtcttgaacacgtgcaaaat
tcagacagtggctcaatgacattctgctcaaaggcagggtcatcttctcaacgagcatct
ccgtttcatgaaattgttggatatgccacagaacagctttctagcagtagtctctgcagt
agtccagatgacactagctgtgatggaattaaacttgaagaaactgaagcatggcagttt
cgattcgcttattcatccacatggtctggaatggtacttgcaatctgctcttatcttgat
cgttacttcttggcttctgctggcaatgctttttatgtatgtggtttccccaatgacaac
ccacaaagagtgagaaagtttaatgtggcaaggacacgttttatgattacatcattgact
gcacatttcactacaattgctgttggtgattgtcgtgatggtgtccttttctatgcttat
catgaggattccaaaaagctgcagcaactgtactttgatccatgtcagagattagttgct
gattgcattcttatggatgtcaatactgctgttgtttcagatcggaagggaagcattgct
gtcctttcatctgcagattactcagaagatagtgcaagtccagaatgtaatttaacagtg
agctgtgcttattatatgggggagatagctatgagcatcaggaaggggtcattttcatat
aaacttccagctgatgatgtattgaagggcagtgatggaaatatcgacttctctcgaaat
gctatcattgtgagtacgctgcttggaagcataataacctttgttccaatatccagggaa
gaatatgaactcttagaagctgtccaagatagactggtggtgcatccgttaactgctcct
attcttgggaatgatcacaatgagtatcgtggtcgtgaaaacccggcgggagtacctaag
atacttgacggggacatgctctctcaattcttggagctcacaagtatgcaacaagaggct
gtactatcatcaccctttggtgcacaaggcacaccaaagccctctctgaaatcacgacat
gtaccaatacctgttaatcaggttgttcaactcctcgagcgggttcattatgccttaaac
taa

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