KEGG   Malus domestica (apple): 103424454
Entry
103424454         CDS       T03194                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like isoform X1
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdm03009]
    103424454
Ribosome biogenesis [BR:mdm03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    103424454
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR36-Utp21_2nd WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_IP5PC_F Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_VPS8 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_DCAF12 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 103424454
NCBI-ProteinID: XP_008360757
LinkDB
Position
14:join(24563117..24563235,24563343..24563487,24563593..24563795,24564055..24564176,24564849..24565045)
AA seq 261 aa
MPKTWRGDDKSLSCMLLSDDGSLLVSGSDDGMICVWNLISLLDVENVESFPSPLHYSTEH
KSAIAGLLTTSGISSPVLISSSLDGSCKVWDLVLGNLMHTLVYPPGITAVALHPKKQLIF
SGSIDGRIFVNKLEIGLVEDYLVGAEDQSPVLKGHNGSVTALTFSESGLISASEDCTICI
WDISSCEIIRRFNHQKGPVTNLAVIPQSSLLPVSNHRKKSNAFGVSVLGKHPQPANSSNE
KITLFSPCHSRKPNLHQFPDH
NT seq 786 nt   +upstreamnt  +downstreamnt
atgcccaaaacttggcgtggagatgataaatctttgagctgcatgctgctttcggatgat
ggttctcttcttgtttctggttcagatgatgggatgatatgcgtgtggaacttgattagt
ttgctggatgtagaaaatgttgaaagctttccgtcaccattacattattcaacggagcat
aaatccgctatagctggcttgttaactacatcaggcatctcaagtccagtgttaatatca
agctcacttgatggctcgtgcaaggtttgggatttagtcttgggaaacctcatgcatact
ctagtttatccaccagggataactgcagttgctcttcacccaaagaagcagttaattttc
tccggaagtatagacggaagaatttttgtgaacaaactcgaaatcggactggtagaggat
tatttggttggtgctgaagatcaatcacctgtgctaaaaggacacaacggatctgttact
gcattaaccttcagcgaatctggtttgatatccgcatctgaggactgcaccatctgcatt
tgggatatcagcagttgtgaaatcatccgaagattcaaccatcagaaagggcctgtaact
aatctggcagtgattccacagtcctcgttgcttcctgtgtcaaaccatcgtaaaaagtct
aatgcatttggtgtttctgtgctcggtaagcatccacaacctgccaactcatccaacgag
aagatcactcttttttcaccatgccactcccggaaaccaaatctccatcaatttccagac
cactga

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