Malus domestica (apple): 103424922
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Entry
103424922 CDS
T03194
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6-like
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdm01002
]
103424922
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103424922
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103424922
Peptidases and inhibitors [BR:
mdm01002
]
Cysteine peptidases
Family C85
103424922
Ubiquitin system [BR:
mdm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
103424922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
PRIMA1
UBA_9
Motif
Other DBs
NCBI-GeneID:
103424922
NCBI-ProteinID:
XP_008361233
LinkDB
All DBs
Position
03:join(16117424..16118113,16118623..16118784,16119320..16119397,16121487..16121565,16121654..16121805,16123053..16123118,16123212..16123383,16123627..16123841)
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AA seq
537 aa
AA seq
DB search
MTRILVQRGSSSGSSSNPTRPSSLSGSSSAWAQSQVNNPQALSVVKDEEIVEEAQENVFV
DELPEYCGSGDNKAVKNDDLLTESCNDDNVSSSDELAEGEKVGKNDIASPGELMKGLDGV
RISERVTVENVDSSSDSLQNVIASSQPPPPPVPPPPKLSSANSNSRRSVSGSSNAVRIGP
SRRAAAWPVVSTRTSPNGSLPSSPRSHGESEGYNSADEHSPCFVSSYDDTERERQFEIDI
RRAKGFEVKRMLEDGNCLFRAVADQVYGDSEAYDLIRQMCIDYMERERDHFSQFITEGFT
SYCKRKRRDKVYGNNIEIQALSEMYNRPIHIYSYSTEPINIFHGSYDTDTPPLRLSYHHG
NHYNSLVDPRRQTIGVGLGFSRLRGMGSNIDKDQVKAAIKAQQDQQIDNALLAEGRFYSD
LELTEKEIERMVMEASRLEYADGTFKQQLGRRESSTSSAEPSSSGARSSGSETKVEEREQ
GFQDSTLSSSMQVVLSMGFSYLQVIEAYSIFGDDVDSMVCYLLETSSSSRRKGKATE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgactagaattctggttcagcgaggttcttcaagtggttcttcttccaacccaactcgt
ccttcttccttgtctgggtcttcttctgcttgggcacagtcacaggttaataatcctcag
gctctttcggttgtgaaagatgaggaaattgtagaggaggcacaagaaaatgtttttgtg
gatgagctgccagagtattgtgggagtggtgacaataaggccgtgaaaaatgatgatctt
ttgacagaaagctgtaatgatgacaatgtgagttcaagtgatgaactagctgagggggaa
aaagttggtaaaaatgacattgccagtcctggggaattgatgaaaggtttagacggggtg
aggatttctgaaagggtgacagttgaaaatgtggactcaagcagtgattctttacaaaat
gtgattgcgagttctcagccaccacctcctccagtccctcctcccccaaaactttcctca
gcaaactcgaattcaaggagatctgtctcagggagttcaaatgctgtccggattggacct
tctagaagagcagctgcctggcctgttgtttcaactaggacttcgccaaatgggtcactg
ccttcttctcccaggtcccatggtgaaagcgaggggtacaatagtgctgatgagcatagt
ccttgctttgtatcttcctatgatgacactgaaagagaacgacagtttgaaattgatatt
aggcgtgcaaaaggttttgaagtgaaaagaatgctggaggatgggaattgtctctttcgt
gctgttgcagatcaagtttatggggattctgaagcctatgacttgatccggcaaatgtgc
atagattacatggaacgagagagggatcacttttctcaatttattacagaaggatttacc
tcttattgtaagaggaaaagaagagacaaggtctatggaaacaatattgagatccaagcc
ttatctgaaatgtataatcggcccatccatatttattcctatagcacagaaccgattaat
attttccatggaagctatgacactgacacaccacccctacgactaagttatcatcatgga
aatcattacaactctcttgttgatccccgtcgtcagaccatcggtgtaggacttgggttc
agccgtcttcgtggaatgggttcaaatattgacaaggatcaggtcaaggctgctattaag
gctcaacaggaccaacaaattgataatgcacttctagctgaggggcgattttactcggat
ctggagcttactgagaaagaaattgagcgtatggttatggaagcttcgaggcttgaatac
gcagacggcacatttaagcaacaacttggacgtagagaatcttccacttctagtgctgag
ccgtcatcttcgggagctagatcatcaggcagtgagactaaagttgaagagagggagcaa
ggatttcaggattcgacccttagcagtagtatgcaagttgtgctatcgatggggttcagc
tatctgcaggtgattgaggcatacagcatattcggagatgatgttgattccatggtttgt
tacttgttggaaactagcagcagtagccggcgcaaaggcaaggcaaccgaatga
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