KEGG   Malus domestica (apple): 103425826
Entry
103425826         CDS       T03194                                 
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdm03036]
    103425826
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     103425826
    REST complex
     103425826
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103425826
SSDB
Motif
Pfam: PAH Sin3a_C Sin3_corepress PAH_ZNF598
Other DBs
NCBI-GeneID: 103425826
NCBI-ProteinID: XP_028953667
LinkDB
Position
17:complement(join(2988327..2988461,2988622..2988733,2989440..2989603,2989689..2989841,2989946..2990084,2990193..2990293,2990379..2990993,2991100..2991191,2991314..2991985,2992096..2992350,2992459..2992586,2992778..2992932,2993008..2993207,2993389..2993418,2993514..2993589,2993787..2993923,2994441..2994738,2994825..2994998,2995122..2995220,2995302..2995482,2995578..2995784,2996442..2996515))
AA seq 1398 aa
MKRVRDDVFGGAQLKRPPGSSRGDSQSQIPGGGGGGGGVGVGGGGPIGGVGGASQKLTTN
DALTYLKEVKDMFLDQREKYDTFLEVMKDFKAQRTDTAGVIARVKELFKGHNNLILGFNT
FLPKGYEITLDEDETPPKKTVEFEEAISFVNKIKKRFQNDDHVYKSFLDILNMYRKEHKD
INEVYSEVAALFDEHPDLLDEFTRFLPDASAAASAHQAQYGHNSFPRFNERSSATPTFRP
MHMEKQRRRDRIMTPHADRDLSVDRPELDDDKGMVKVPKEHRKRSEKENRDRRNRDDDDR
ELENDNNRDYKLQRFPDKRKPSRKVEGFGVTANFAPYDDKDSLKSMYSQGFIFCEKVKER
LCSQDDYEAFLKLLNIYSNGIIKRNDLQGLVTDLLGKYSDLMEEFNDFLERCENIDGFLA
GVMSRKSLSSDGPVPSSRSLKVEDKDKEPKREMEGAKEKERYREKYWAKSIQELDLSNCE
RCTPSYRLLPEDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRC
EDDRFELDMLLESVSSTAKRAEELLNSINENKISMETVIRIEDHFTALNLRCIERLYGDH
GLDVMDILRKNPTLALPVVLTRLKQKQDEWTRCRSDFYKVWADIYAKNHYKSLDHRSFYF
KQQDSKNLSSKSLVAEIKELKEKKQIEDDILLAVAAGNRQSIVPHMEYEYLDISLHEDLY
KLVQYSCEEVFSTKEQLNKAMRLYTTILEPMLGVSSRPNDSEDDEDVDKSRNQAKNCIAS
SIGESDGSPGGDSAPVNLKQPKSVCNEEGNALAEVESLANGDNSAKEDGSRDAHPVSRKD
STSEKLQLERDQKNTDVPKKRFLATNTDNAWPSSQPSHPIGADNNHGRTSLEVLSGCVAT
TSRAGASISGNDPLQQGNADAVPSSEGGDIAKPALIANGVFPESTKVKSHHEESLGPSKI
EKEEGELSPIADFGEDNFVVPGDAGVQAKANRSIESRLFQSGNREDISGQEAGDNDADAD
DENSENVSEAGEDVSGSETAGDECSREEQGDDEDAEQDDIDGKAESEGEAEGMADGHLVG
GDGMCSPLSECFLLSVKPLAKHVPGSLLEERKDSRVFYGNDNFYVLYRLHQILYERILSA
KTSSTGAEMKWRTSKDGSSPDLYDRFMSALYNLLDGSVDNAKFEDECRAIIGNQSYILFT
LDKLIYKFVKQLQTVASDETDNKLLQLYEYEKSRKTGKLIDSVYHENARVLIHEENIYRL
EFSSVPSRLSIQLMDSVSEKPEVFAVSMEPNFASYLHNEFLPVFPGKKEPHGITLQRNKR
KYAGQDESSAFCRAMDGVRLVNGLECKIACNSSKISYVLDTEDYFFRMRRKRRTSGARSP
YCDQTRVQRFHKFLSVSS
NT seq 4197 nt   +upstreamnt  +downstreamnt
atgaagagagtaagagatgatgtgttcggcggtgctcaattgaagcggccccccggttcg
tcgcgcggggactcgcaatcccagataccggggggaggaggtggaggagggggcgttgga
gtaggtggaggtgggcccattggaggagtaggaggtgcttcacagaaattgaccaccaat
gacgctctaacgtacctcaaagaagtgaaggacatgtttctagaccaaagagaaaaatac
gatacatttcttgaggtcatgaaagatttcaaggctcaaagaaccgacacagcaggtgtc
attgcaagagtaaaggaattatttaaagggcataacaacttaattttgggctttaatacc
ttcttgccgaagggttatgagataacccttgatgaagatgagactccaccaaaaaagaca
gttgagtttgaggaagctatcagttttgtaaacaagataaagaaacgtttccaaaatgat
gatcatgtctataaatcattcctggacatactaaacatgtatcgaaaggagcacaaggat
ataaatgaagtttacagtgaggttgctgctctttttgatgagcatccagatttacttgat
gagttcaccagatttttaccagatgcgtcagcagcagcttcagcacatcaagctcaatat
ggccacaattcatttccccgtttcaatgagcgaagctctgctacacccacatttcggcca
atgcatatggagaagcaacgtaggagggataggatcatgacaccccatgctgatcgtgat
cttagtgttgatcgtcctgagctcgacgatgacaaaggaatggtgaaagttccgaaggag
cacagaaagcgtagtgaaaaggagaatagggatagaagaaatcgggacgatgatgataga
gaattagagaatgataacaatagggactacaaattacagcgttttcctgataaaagaaaa
ccctccaggaaggttgaaggttttggtgtgactgctaacttcgctccttatgatgacaaa
gactccttaaagagcatgtacagccagggattcattttctgtgagaaggtgaaggagagg
ttgtgtagtcaagatgactacgaggcatttttgaagttgcttaacatatatagcaacgga
attattaaaaggaatgatctgcaaggtttggtgactgatttattgggaaagtattcagat
cttatggaggagtttaatgattttttggagcgttgcgagaatatagatgggttccttgct
ggtgttatgagtagaaaatctctgagtagtgatggtcctgttccttcatctagatccctg
aaggtagaggacaaagataaagagccaaagcgtgaaatggagggagctaaagaaaaggaa
agatacagggagaagtattgggcaaaatctattcaagagcttgacctctctaactgtgaa
cgttgtactccaagctatcggcttctgcctgaagactatccaataccttcagcaagccag
agatcagaacttggtgctcaggttctgaatgaccattgggtatctgtgacttcaggaagt
gaagattactcttttaaacatatgcgcagaaatcagtatgaagaaagtctgttcagatgt
gaggatgataggtttgagttggatatgttgttagagtcggtgagctcaactgctaagcga
gcagaggaactcttgaacagcatcaatgaaaataagatcagcatggaaactgtaatccgt
attgaagaccacttcactgctttaaacttaaggtgcattgaacgtttatatggtgaccat
ggtcttgatgtgatggacatactgcggaaaaatccaactctggccttgcctgttgtatta
actcgcctgaagcagaaacaagatgaatggacaaggtgtagatccgatttttacaaggtt
tgggcagatatatatgccaaaaaccattacaaatcacttgatcaccggagcttctatttc
aagcaacaagattcaaagaacttgagtagcaaatctttggtggctgagatcaaagaattg
aaagagaaaaagcagatagaggatgatatccttctggctgttgctgctggaaacaggcaa
tctatagttccacatatggagtatgaatacttagatatcagcttacatgaagacttgtat
aaacttgtccaatattcatgtgaagaggttttctcaacgaaagaacaattaaataaggct
atgagactttacactaccattttggagccaatgctgggtgtttcttctcgacccaacgat
tcagaggatgatgaagatgtcgacaaaagtaggaatcaggctaagaattgtattgcttca
agcataggagaaagcgatggaagtcctggtggcgattctgccccagtgaatcttaagcag
cccaaatctgtgtgtaatgaagaaggaaatgctttagcagaagttgaaagtttggctaac
ggggataactcagctaaagaagatggaagtcgtgatgcacatcctgtctctaggaaagat
tccacatctgagaaacttcaactagagagagaccagaaaaatacggatgtccctaagaaa
aggtttctggccaccaacacggacaatgcatggccgtccagtcaaccatcacatccaatt
ggagcagataataatcatggtagaacgagcttggaagtgctatcagggtgtgttgcaacc
acatcaagggctggtgcctctattagtggcaatgaccctttacagcaaggaaatgctgat
gctgttccgtcatcagagggtggtgatattgcaaaacctgctttaattgctaatggagta
tttccagaaagcactaaagttaaaagtcatcatgaagagtctcttgggccctccaaaatt
gaaaaggaagagggggaattatcaccaattgctgactttggggaggataactttgttgtc
cctggagatgctggggtgcaagctaaggcaaaccgcagtattgaaagtagactgtttcag
tctgggaatagggaagacattagtggtcaggaagctggagacaatgatgcagatgcagat
gatgaaaacagtgaaaatgtttccgaggctggtgaagatgtctctggcagtgagacagct
ggtgatgaatgttcccgagaagagcaaggtgatgatgaagatgctgaacaagatgacatt
gatggtaaggctgagagcgaaggtgaggctgaagggatggctgatggacatcttgttgga
ggagatggaatgtgttcgccgttgtccgaatgttttcttttatctgtgaaacctcttgcg
aagcatgtaccaggttctttacttgaagaaaggaaagactctcgtgttttctatgggaat
gataatttctatgtgctttataggcttcatcaaattctatatgaaaggattttatctgca
aaaacaagttccacaggtgcagaaatgaaatggagaacttcaaaggatggcagctctccg
gatctgtatgacagatttatgagtgctctatacaatttgctagatggatctgttgataac
gcaaaatttgaggatgaatgccgagctattattggaaaccagtcatatatattattcacc
ttggacaaattaatatataaattcgtcaaacagcttcaaactgttgcaagtgatgagact
gacaataagctgcttcaattatatgaatatgaaaagtcccggaaaactgggaagttaatt
gattctgtttaccatgaaaatgcacgtgtcctcattcatgaggagaatatttacagattg
gagttttcctctgtgccctcccgactgtccatccagttgatggacagtgtgagtgaaaag
cccgaggtgtttgcagtttctatggaacctaattttgcatcctatctgcacaatgaattt
ctgccggtttttcctggaaaaaaggagccgcatgggattacccttcagagaaacaagcgc
aaatatgcagggcaagatgaatcctctgccttttgcagggccatggatggtgttcggtta
gtcaatggattggagtgcaagatagcttgcaactcatccaagatctcttacgttcttgac
acagaagattacttcttccgtatgagaaggaaaaggagaacatctggggccagatcaccg
tattgtgatcagacgagagtacagcggttccacaaattcttatcagtctcatcatag

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