Malus domestica (apple): 103425850
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Entry
103425850 CDS
T03194
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103425850
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103425850
Surveillance factors
Other surveillance factors
103425850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
SAP25
Motif
Other DBs
NCBI-GeneID:
103425850
NCBI-ProteinID:
XP_028952776
LinkDB
All DBs
Position
17:join(495644..495719,496183..496248,496390..496481,496959..497798,497970..498066,498156..498314,498417..498529,498648..499065,499155..501293,501373..501445,501650..502058)
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AA seq
1493 aa
AA seq
DB search
MAHGKVSLPQDLLPSNLVDSHFSAKDEAFQGNIEEKALTGSLDMSIGDQVASDSSIPLSP
QWLYAKPDSKTLATGASGEMHANDSLSHGNSTDPNSRDIWRVDGSQEKKDWKRSAPDLDS
SRRWREEERETGLLGRRDRKKEDRHVGASLTRDATENTAEDRRVGATSTKDAAENKLLSS
DRRNESRRDNKWSSRWGPEDKDKDSRIEKRAEVEREDVHAEKQSFSNSNRAASERDSDSR
DKWRPRHRIEVQPAGAAPYHAAPGFGMARGRVEKVGFAAGRGRSNTGCLQIGKPVLGKSG
HFADMYCYPRGKLLDIYRKQKKDSTFDIMPDGMEHVSPITQVGSIEPLAFVAPDAEEEAG
LGDILKGRITSSEVVYNLSGDKNVLNEDAKGSSNVTLSKEEGHFAANPEQNVQSAEKVIL
NNSFPVTVAEVSPICGLQTFMLKECVATEGEQKVLTVTAAADREIGPSNDDANSRSSGCQ
EQTSSSDHHYFKSNEDALLLERIVSPEDMSLCYLDPQGNIQGPFLGIDIIAWFEQGFFGI
DLPVRSFDAPNGSPFQELGEMMPHLKTKSGPVSDSSLPTQLEPLGAVGGSLDERISAPNY
DGGSAILNNQGIQNVVAEDEEIVFPGRSKGSSDCLLRSSPDIHGSFANLPSLHSLANEVS
ETNIPDQQDEKLHPFGLLMSELGGNSLLRPAQSSHSFFGMDDQVPFRDTFVEGATVANQD
SLGAMIDQPSFVETRPDNYIKNNTNVSLGSIDSPHLPHMGQASNGFDPAEHIMSQKLLKE
QLQQLNHLSPFTVAHSAGTGVDRFPGFGFSDSKNPNIQPSFHHPVADMEHIFEMQHQQQR
QLELRQQQHELELQQQQRKLERQQQQRWLELQEHQRQLELQEHQRQLEIQRQHQLELQHH
RQLELQQQQRQLELQQQRLLQDQLHQHQMKLQQQQKSQAQHLLLEHFLHQQMSDSGYGQW
KADATRGNPFDHLHSRKHLLDDLHQMSHSSRHDPLLEHIIQANIGRPGQTDFFDLISQAK
QRNMHTSELQPRLQQHELQAQQLSAALREQLQMEGERHIGANRFVDEASQVVRDPVGHHQ
AQMVGFSSSENYQQLPTHEPQLSHLNWNHAIREQLQGGFYEPNSLEFERSSVPASSLGMN
LDILSARGQGLDEFYSSHPFGLEHLPFGNNGHLEDGSAEALVPHSHLHAEQTRRDSEAAM
DFSDANIWSSSDGDKEPSKQIFMDLHQKIGRQSTRLSEVDYQHHLSSSRNRGESVHHPFS
LLPDQAVGMNNSFTEGPFTSNPRAFMEDLSELEGNNWKKQVVKSYEGNMVEQEETSRELH
SNAHSRQSSLSSAGGGGSFYSSETGIDKPLGEEISNGRLPSTVTKGYDNALHRRRVLCSQ
DVLSEAAQRNPAATQVSETQASSKNDAQFRRTSSYSDATVSEASFIDMLKKPVISEADAA
NRAVALESSDGGGQAGRTGKKKGKKGRQIDPALLGFKVSSNRILMGEIHRLND
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacggaaaagtcagtctccctcaagatctcctcccctcgaatctggtcgattca
cacttctccgccaaagatgaagccttccaaggaaacattgaggagaaggcgctaacgggg
tcccttgacatgtcaattggtgatcaagttgcctcagacagcagcatccctttgtctccc
cagtggctgtatgctaaaccagattccaagacactggcaactggagcatcaggagaaatg
catgcaaatgattctctgtctcatggaaactcaactgatcccaattcgagagacatttgg
cgtgtagatggatctcaggagaaaaaagattggaagaggagtgcacctgatttagatagt
agccgccgctggcgtgaagaggagagagaaacaggcttacttggtaggagagatcgaaag
aaagaagatcgccatgtaggtgctagtctaacgagggatgctactgagaatacagcagaa
gatcgccgtgtaggtgcgacttcaactaaggatgctgcagaaaataaactattgtcttct
gaccgccggaatgaatcccgaagagataacaaatggtcatcaaggtgggggcctgaagat
aaagacaaggactctcggatagagaaaagggctgaggtcgagagggaagatgtacatgct
gagaagcagtctttttccaatagcaaccgtgcagcttctgagcgtgatagtgattctcgt
gataagtggaggccgcgccatcgcatagaggttcaaccagctggggcagccccatatcat
gctgcaccaggatttgggatggctcgggggcgtgtggaaaaagtaggatttgctgctgga
cgagggaggtctaacactggatgcctacagattggcaaacctgttcttggaaaatctggc
cattttgctgatatgtattgctatcccagaggaaagctccttgatatttatcgcaagcaa
aagaaggattcaacttttgatattatgcctgatgggatggagcatgtatcaccaataacc
caagtgggctcgattgagccattggcttttgttgcacctgatgcagaggaagaggctggt
ctgggagatatattgaagggaagaattactagcagtgaagtggtatacaacttgtctggg
gacaagaatgtattaaatgaagatgctaaaggatctagcaatgtcactttaagcaaggag
gaaggacactttgcagctaacccagaacaaaatgtccaatctgccgaaaaggtcattttg
aacaattcttttccagttactgtcgctgaggtgtcacctatttgtggcttacaaacattt
atgttaaaggaatgtgttgctactgaaggtgagcagaaagttctgacagtcacagcagcg
gcagatagggagattggtcctagtaatgatgatgctaactcaagaagttcagggtgccag
gagcaaacctcaagcagtgatcatcactatttcaagagcaatgaggacgcccttctattg
gaaagaattgtctcacctgaggatatgagtttgtgctaccttgatcctcaagggaatatc
caggggcctttcctggggatcgatataattgcatggtttgagcaaggatttttcggaatt
gacttgccagttcgttcatttgatgctcccaatggatctcctttccaagaacttggtgaa
atgatgccacatctgaaaactaaatctgggcctgtctccgactctagtttgcctactcaa
ttagagccattgggtgctgttggaggcagcttggacgagagaatatctgctcctaactat
gatggggggtctgctattctaaacaatcaaggcattcagaatgttgttgcagaagatgag
gaaattgtatttcctggaaggtctaaaggcagcagcgattgccttttaaggtcttcacct
gacattcatggctcatttgcaaatcttcccagccttcattcccttgcaaatgaagtttcg
gaaactaacatccctgatcagcaggacgaaaagctgcatccttttggcctgttgatgtca
gagctcggaggcaactcacttttaaggcctgctcaatcatctcattcgtttttcggcatg
gatgatcaggttccttttagagataccttcgttgaaggtgccactgttgctaatcaggat
tcccttggtgccatgattgatcaaccttccttcgtggagacacggcctgataattatata
aaaaataacaccaatgttagtctgggttctatagattctccccatttacctcacatgggg
caagcaagcaatggctttgacccagcagaacatataatgtcacagaagttactaaaagaa
cagcttcagcagctgaaccatctttctccatttaccgttgcacatagtgcaggaacagga
gtggaccggttccctggatttggtttttctgacagcaagaaccctaatatccagccgtca
ttccatcatccagtggcagatatggaacatatttttgaaatgcagcatcagcagcagcgt
cagttggagcttcgtcagcagcaacacgagttggagcttcagcaacagcagcgtaagttg
gagcgtcagcaacagcagcgttggttggagcttcaggaacaccagcgtcagttggagctt
caggaacaccaacgtcagttggagattcagcgccagcatcagttggagctacagcaccac
cgtcaattggagcttcagcagcagcagcgtcagctggagcttcagcaacagcgtctcttg
caggatcaacttcaccaacaccaaatgaaattgcagcaacaacagaaatctcaagctcaa
cacttgctccttgaacattttttgcatcaacagatgtccgattctggttatgggcagtgg
aaggcagatgctacaagaggcaaccctttcgatcatttacattcaaggaagcaccttcta
gatgacttgcaccagatgtcccattcctcgaggcatgatccattattagagcacatcatc
caagcaaatataggacgcccgggacagactgatttctttgacctgatatctcaggccaag
caaaggaatatgcacacttcggagctgcaacctcgtcttcagcagcatgagctgcaggca
cagcagttgtccgcagcattgagggagcaactgcagatggaaggggaaaggcatatcggt
gcgaaccggtttgtagatgaagcaagccaagttgttagggatcctgttggtcatcaccag
gctcagatggtaggatttagttcttcagaaaattaccagcaacttcccacccatgaaccg
caactaagccatctcaactggaatcatgccatacgtgagcaactccagggagggttctac
gaacctaactctctggaatttgagaggtcatctgttcctgctagttcgcttgggatgaac
ttggatattctcagtgcacgtgggcagggtctggatgagttttattcgtctcatccattt
ggtttggagcacttgccttttgggaacaatggacatctggaagatggctccgctgaagca
cttgtaccgcattcgcatcttcatgccgagcaaacccgccgagactcagaagctgccatg
gatttttctgatgcaaatatatggtcttcatccgatggtgataaagaaccctcaaaacaa
atttttatggaccttcaccaaaaaatcggtcgtcaatctacacggttatcagaagttgat
tatcagcatcacctatcatcttctagaaaccggggagaatctgtacatcatccatttagt
cttctccctgatcaagcagttggtatgaacaactctttcacggaagggccctttacatct
aatcccagagcatttatggaagatttatcagagttggagggaaataattggaagaagcag
gttgtgaaaagctatgaaggcaacatggtagaacaagaagaaacatcaagggaacttcat
agtaatgcccatagcaggcagagttcacttagcagtgctgggggaggtgggagtttttac
agctccgagacaggaatagataaaccgcttggagaagagatttctaatgggaggctgcct
tctactgtaaccaaagggtacgacaatgctttgcatagacgccgggttttatgttcccag
gacgttttgtctgaggcagcacaaagaaatccagctgcaacccaggtctctgaaacgcaa
gcatctagcaagaatgatgcgcaatttaggaggacttcgtcttacagtgacgctacagtg
tccgaggcatcattcatagacatgctcaagaaaccagtcatttcagaggctgatgcagcc
aacagagcagtggcactggagtcatctgatggaggtggccaagcggggcggacgggcaag
aagaaagggaagaagggaagacagattgatcctgctctcctcggctttaaggtttccagc
aaccggatcttgatgggcgagatccatcgcctcaatgattga
DBGET
integrated database retrieval system
