Malus domestica (apple): 103425912
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Entry
103425912 CDS
T03194
Name
(RefSeq) uncharacterized protein isoform X2
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00260
Glycine, serine and threonine metabolism
mdm00400
Phenylalanine, tyrosine and tryptophan biosynthesis
mdm01100
Metabolic pathways
mdm01110
Biosynthesis of secondary metabolites
mdm01230
Biosynthesis of amino acids
Module
mdm_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
103425912
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
103425912
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
103425912
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Gene cluster
GFIT
Motif
Pfam:
PALP
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-GeneID:
103425912
NCBI-ProteinID:
XP_017185208
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Position
17:join(5603315..5603598,5603696..5603912,5604122..5604659,5604746..5604844,5605104..5605360)
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AA seq
464 aa
AA seq
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MHLRLSNGCRARASLNADSKSIEIPRQWYNLIADLPVKPPPPLHPKTFEPIKPEDLSPLF
PDELIKQEASNERFIDIPDEVRDVYKLWRPSPLIRAKRLEKLLDTPARIYYKYEGVSPAG
SHKPNSAVPQVWYNAQEGIKKVVTETGAGQWGSALAFACTLFDVECEVWQVRASFDQKPY
RRLMMQTWGAKVYPSPSTLTEAGRKILQMDPSSPGSLGIAISEAVEIAAMNGDTKYCLGS
VLNHVLLHQTVIGEECLKQMEAIGEVPDVIIGCTGGGSNFAGLSFPFIREKLKGKMNPVI
RAVEPAACPSLTKGVYAYDYGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMSPLISH
VYELGYMEAISIPQIECFQGAIKFARTEGLIPAPEPTHAIAATIREAQKCRETGEAKVIL
TAMCGHGHFDLPAYENYLRGNLVDLSFEEEKIQASLASVPKVGG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgaggctttcaaatggctgtagagcaagagcatctctcaatgccgattcaaag
tcaattgaaatccctcgacagtggtataacttgattgcagaccttcctgtaaaaccacct
cctccattgcatcccaagacttttgaaccgattaaacctgaagatttgtctcctctattt
cccgatgagttgattaagcaggaggcaagcaacgaaagattcatagatatcccagatgag
gttcgtgatgtatacaagctttggcgcccatcacctctcattagggccaagaggttggag
aagcttcttgacacacctgccagaatttactacaagtatgaaggtgtcagcccggctgga
tcacacaagcccaactctgcagttccacaagtgtggtataatgcacaagaaggaatcaag
aaggtcgtgacagaaacgggagctggccaatggggaagtgcattggcttttgcttgcacc
ttatttgatgttgagtgtgaggtgtggcaagtgcgtgcatcttttgatcagaaaccatat
cgcagattgatgatgcaaacttggggtgcaaaggtatacccatctccatccaccctaacc
gaagcaggtagaaaaatccttcaaatggatccatccagccctggaagtttgggaatagct
atttctgaagccgtggagattgcagctatgaatggtgatactaaatactgtctaggaagt
gttctcaaccatgttttgcttcaccagacagtaataggagaggagtgtctaaaacaaatg
gaggcgataggtgaagtaccggatgttatcataggatgtactggtggaggatccaatttt
gcagggctcagtttcccattcatcagggagaagctgaaagggaaaatgaaccctgtaatt
agagcagttgaacctgcagcatgtccttcgttaactaaaggggtatacgcatatgattat
ggcgatacagcggggctgactccactaatgaagatgcatacgcttgggcacgacttcatc
cctgacccaattcatgctggaggattgcgctaccatggtatgtcaccgttaatttcacac
gtctacgaactgggttacatggaagcaatttcaattccccagattgagtgctttcaaggt
gctataaaatttgctagaaccgaaggattgataccagcgccagagccaacacatgccata
gctgccaccatcagggaagctcagaaatgtcgagagaccggagaagccaaagtgattctc
acagcaatgtgtgggcatggacattttgatttgccagcttatgagaattatctgcgagga
aatctggtggatttgtcatttgaagaggagaagattcaagcatcattggctagtgttcct
aaagtaggtggctga
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