Malus domestica (apple): 103425987
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Entry
103425987 CDS
T03194
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
mdm
Malus domestica (apple)
Pathway
mdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103425987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103425987
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103425987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
103425987
NCBI-ProteinID:
XP_028944690
LinkDB
All DBs
Position
11:join(28470497..28470718,28470999..28472193,28472658..28472671)
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AA seq
476 aa
AA seq
DB search
MEPDHGKLFIGGISWDTDEERLKEYFRKYGEVVEAVIMRDRATGRARGFGFVVFADPAVA
ERVVMDKHMIDCRTVEAKKAVPKEDQHILNRTGVVNGSPGPGRTKKIFVGGLASTVTESD
FKKYFDQFGTVTDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRA
VPKELSPGPSRSPMIGYNYSPGRTNSLLNSYAQGYNTSPIGGFGINVDTRFNPISSGRSG
LSPFGTSGYGIGMNMEPGLSPTYGGNSNFVSSLGYARMLSPFYSGNSNRYSTPIGYNAGN
GRRSPVVNSTTRNVWRNSGINNNSNPASTGACLSSANGGFEVTIGNNGSNWGANSFSTEG
RGSDSGYNSANGYGSGGSSFGLGGGGYGRNGGTGIAPTSSFPGSTVGYEGFYGDLYQNGS
VYGDSTWRSSSPDLDGSSTFGYGLSDLPADITAKSSGGYIGGYNVTSTQPNRGVAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagatcatgggaagctcttcattggtgggatttcctgggacacagatgaggaa
cggctcaaggaatatttcaggaagtatggagaggtggtggaggctgtgatcatgagggat
cgtgcaaccggtcgtgctcgtggattcgggtttgttgtctttgcggatcctgcggttgca
gaaagagttgtcatggataagcacatgatcgattgccgcacagtggaagcaaagaaggct
gttccaaaggaggatcagcacattttaaacagaaccggggttgtcaatggttccccgggt
cctggacgcacaaaaaagatttttgttggaggtttagcatccacagtgaccgagagtgac
tttaagaagtactttgatcaatttggtacagtcactgatgttgtagtaatgtatgatcac
aacactcaaaggccaagaggcttcggatttatcacttatgactcggaggaggctgttgac
agagttctgcataaaacatttcatgaactcaatggtaagatggttgaggtcaagagggca
gtccctaaggagctatccccaggacccagccggagccctatgataggatacaactatagt
ccgggtaggaccaatagtttgcttaacagctatgctcagggttataatacgagcccaatc
ggaggttttggcattaatgtggacaccaggttcaatccaatctctagtggtcgtagcggg
ttgtctccatttggcacttctggatatggaataggtatgaatatggagccagggttgagc
ccaacctatggcggaaattccaactttgtcagtagtctaggatatgcacggatgttgagc
cccttttatagtggcaattcaaacaggtatagtacccctattggatataatgccggtaat
ggaaggagaagtcctgtagtaaactcaactactcggaatgtctggcgaaatagtggcatc
aacaataactcaaaccctgccagtaccggggcctgcttgagctctgcaaatggaggtttt
gaagttacgattggaaacaatggttcaaattggggcgctaattctttttcaactgaaggt
agaggcagtgattctggctataatagtgccaatggttatggaagtggaggtagcagcttt
gggttgggaggaggaggatatggaagaaacggtggcactggtatagccccaacttcatca
tttcccggatcaactgttggttatgagggcttttatggggacttgtaccagaacggttca
gtttatggcgactcaacttggcgctcaagcagtcctgatctagatggttctagcacattc
ggttatgggctgagcgatttacctgcagacatcacagccaaaagttctggtggctatatt
ggaggttacaacgttaccagtacacaaccaaatagaggagttgctgcttag
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