KEGG   Malus domestica (apple): 103426069
Entry
103426069         CDS       T03194                                 
Name
(RefSeq) transcription elongation factor SPT6 homolog
  KO
K11292  transcription elongation factor SPT6
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103426069
   03036 Chromosome and associated proteins [BR:mdm03036]
    103426069
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     103426069
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     103426069
SSDB
Motif
Pfam: SH2_2 HHH_7 YqgF SPT6_acidic Spt6_S1 HTH_44 HHH_9 Tex_central_region HHH_3 SH2 S1 Tex_N MRP-S34
Other DBs
NCBI-GeneID: 103426069
NCBI-ProteinID: XP_008362381
LinkDB
Position
14:join(12249277..12249307,12249413..12249508,12250089..12250218,12250543..12250618,12250747..12250894,12250990..12251122,12251243..12251489,12251572..12251757,12251839..12251964,12252056..12252442,12252522..12252632,12252725..12253504,12253741..12253882,12253957..12255116,12255540..12255749,12256695..12257190,12257831..12258375)
AA seq 1667 aa
MGKAVVSDEEDEVEFDEDDREPLHGDAVDGQDGGDEDEDEEEEGPDEYEKDDFIVDDVDE
DEDQEEEEERADSDEERQRKKKRKKKEEYVLDEDDYELLEDNNVIAPRRKAGKFKRLKKA
QRHGVGEPGGFSDEEEFDGIGKGGRTAEEKLERSLFGHDEGTPFEDIAEEEEPEEAEDDG
EVGEEDEMADFIVDEEFDETGTLVRQRKLKRKRSRQAPGVSSDALQEAHDIFGDVDELLQ
LRKQGLDSSEWRERKLEDEFEPIILSEKYMTEKDDQIREVDVPERVQVYEEITGSFPLDG
ISIDDESTWIYDQLASGTIPLFSKTGLANSISREDINRFLDLHHVQKLDIPFIAMYRKED
CPSLLKDPDHSELEDVNQNENEKSSMLKWHKVLWTIQDLDRKWLLLQKRKSALESYYNKR
FEEESRRIYDESRLTLNQQLFESIMKSLKAAESEREVDDVDTKFNLHFPPGEAGVDEGQY
KRPKRKSLYSVCSKAGLWEVASKFGYSSEQFGLQLSLEKMRMDELEDAKETPEEMASNFT
CAMFETPQAVLKGARHMAAVEISCEPCVRKYVRSNYLDIIELSTSPTLVGNVAVDAFHQF
SGVKWLQRKPLNKFEDAQWLLIQKAEEEKLLQVTIKLPEDRLNKLISDFNEYYLSYGVSK
SAQLWNEQRKLILQDALFTFLLPSIEKEARSLLASRAKNWLLMEYGKVLWNKVSVRPYQR
KENDNSSDDEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSHNVNDQQRK
KNDQERVLKFMTDHQPQVAVLGAVNLSCVRLKDDIYEIIFKMVEENPRDVGHDMDGLSIV
YGDESLARLYENSRISSDQLPAQQGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLN
PFENFLTPDEKYMMVEQVMVDVTNQVGLDINLAISHEWLFAPLQFISGLGPRKAASLQRS
LVRSGAIFTRKDLVNPHGLGRKVFVNASGFLRVRRSGLAASSSQYIDLLDDTRIHPEYYI
IAQDLAKDVYDVDGNNDDEDLEMAIEHVRDRPGYLKNLDVEAYAKSKKLENKIQTFYDIR
RELIQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRRVQGQRAICALESGL
TGMLMKEDYSDDSRDIELSDRLNEGDILTCKIKSIQKNRYQVFLSCRESEMRNNRYQNTQ
NLDTYYHEDRRSLQSEQDKAHKEKELAKKHFKPRMIVHPRFQNITADEALKFLSDKDPGE
SVIRPSSRGPSYLTLTLKVYDGVYAHKDIVEGGKDHKDITSLLRIGKTLKIGEDTFEDLD
EVMDRYVDPLVAHLKAILNYRKFRKGTKQEVDELLKMEKLEYPMRIVYSFGISHEHPGTF
ILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLLAYFQRHIDDPQHESGPSIRSVAAM
VPIRSPAAGGSSGASVGSGWGGSTNEGGWRGQSFDRDRSSTPSSRTGRNDHRNGGSRDAH
PSGLPRPYGGRGHCRGGYNNRGNSTSNERQDSGNDAPAWGSDSKDADDGLGNFPGAKVQN
SPGREAFPGGWGAGGSGSGGGGSSWGSGAGSSGNDAWGQGIGGAGGWGVSGANDAAAAAD
NGTSGWGSSAKKKGSGAGDLGWGSETKRSTPSQSGNRWSGTDGGGGW
NT seq 5004 nt   +upstreamnt  +downstreamnt
atgggaaaagctgttgtctctgacgaagaagatgaggtcgagttcgacgaagacgacagg
gaacctcttcacggtgacgccgtcgatggccaggatggcggcgacgaggacgaggatgag
gaagaagaagggccagatgaatatgagaaggatgattttatagtagatgatgtagacgaa
gacgaggaccaagaggaggaagaagagagagcagacagtgatgaagaacggcagaggaag
aagaaaagaaagaaaaaagaggagtatgtccttgatgaagatgactatgagctcttggag
gacaataatgtcattgctccccgaaggaaggctgggaaatttaagcgtctgaaaaaagct
cagaggcatggtgttggtgagcctggtggattttctgatgaggaggagtttgatggtatt
ggtaaaggtggaagaactgcagaggagaaacttgagcgcagcttatttggtcatgatgaa
ggtactccatttgaggacatcgctgaagaggaggaaccagaagaagcggaagatgatgga
gaagttggtgaagaggatgaaatggcagactttatagttgatgaagagtttgatgagact
gggactcttgtgagacagaggaagcttaagagaaaaaggtctaggcaggcaccaggagta
tcatcagatgctttgcaggaagcccatgatatatttggtgatgttgatgaactactgcag
ctccgtaagcaaggtttggattccagtgaatggagggaaaggaagcttgaggatgaattt
gaaccaattattctttctgaaaagtatatgactgagaaggatgaccaaattcgggaggtt
gatgttccagaaagagtgcaggtatatgaggaaatcactggttcttttccactggatgga
attagtatagatgatgagagtacctggatatatgatcaattagcaagtggtacaatacct
ttgtttagcaaaacaggcttggcaaattctattagcagggaagatatcaacagatttttg
gacttgcatcatgtgcagaagcttgacattccttttattgctatgtatcggaaagaggat
tgccctagtttattgaaagatcctgaccattctgaattggaagatgtaaatcagaatgaa
aatgagaaatcatctatgctaaagtggcacaaggtcctttggactattcaggacttggac
agaaaatggctgctgcttcagaagcgaaaaagtgctttggaatcttactacaataagcgg
tttgaggaagaatcccgacgtatatatgatgagagcagacttacattgaatcaacaactt
tttgagtcaatcatgaagtctctcaaggctgcagaatcagaaagagaggttgatgatgtt
gacaccaagtttaacttgcatttccctccgggtgaggctggagtggatgagggacaatat
aagaggcccaagaggaaatctctttacagtgtctgcagtaaggctggcctgtgggaagtt
gcaagcaaattcggttacagctctgagcagtttggactgcaattatctctagaaaaaatg
agaatggatgagttggaggatgccaaggagacaccggaggagatggcttcgaactttaca
tgtgcaatgtttgagacacctcaagctgtgctcaaaggggctaggcatatggcagctgtt
gagataagttgtgagccatgtgttaggaagtatgttcgaagcaactacttggatatcatt
gagttatcgacaagccccacgctggtcggaaatgtggcagtagatgcttttcatcagttc
tctggcgtgaagtggttgcaaagaaagccattaaataaatttgaggatgcacaatggctg
cttatccagaaggccgaggaggagaagcttcttcaggttactattaagttgccagaagac
aggctaaacaagttgataagcgactttaatgagtactatcttagttatggtgttagtaaa
tctgcacaactatggaatgagcaacggaagttgatattgcaggatgccctatttactttt
cttcttccttcaatagaaaaagaagcaagatccttgttggctagcagagcaaaaaactgg
ttactcatggaatatgggaaggttttgtggaataaagtctcagtgagaccataccaacga
aaggaaaatgataatagctcagacgatgaagctgcacccagggtcatggcttgctgctgg
ggccctgggaagccagcaaccacttttgtaatgttagattcatctggtgaggttctagat
gtactttacacgggttccctcactttacgctctcataatgttaatgatcagcagcgaaag
aaaaatgatcaagaacgtgttttgaagttcatgactgatcatcaaccacaagtcgctgtc
ctaggagctgttaatttgtcttgtgttcgcctaaaagatgatatatatgagatcattttt
aagatggtggaggaaaatcctagagatgttggccatgatatggatggtttaagtattgta
tatggggatgaatctttggcccgactgtatgaaaattctcggatttcatctgatcagcta
cctgcacaacaaggcattgtcaagagggctgtggctcttgggcgttatcttcaaaatcca
ttggcaatggttgccacactttgtggaccaggaagagaaatcttatcttggaaactcaat
ccttttgagaactttctcaccccagatgagaagtacatgatggttgaacaggtcatggta
gatgtcacaaaccaggtaggccttgatattaatttggctataagccatgaatggttattt
gcacctttgcaattcatttctgggcttggacctagaaaggcagcatctttgcagagatcg
ttggtaagatctggtgcaatatttactcgaaaggatttggtgaacccgcatgggcttggt
agaaaggtatttgttaatgcatccggtttcttacgtgttcggcggagtgggttggctgct
agcagcagccaatatattgatctgttggatgatacgagaattcatccagaatactatata
attgcgcaagacttggccaaagatgtttatgatgtggatggtaacaatgatgatgaggat
ttggagatggctatagaacacgtcagggatcgacctggttatctaaaaaaccttgatgtt
gaagcttatgctaaaagcaagaagcttgagaataagatacaaacattttatgatataagg
agagaattaattcagggttttcaggattggcgtaaacaatatgaagaaccaagccaggat
gaagagttctatatgatttcaggtgaaactgaggatacccttgctgaaggaagaattgtg
caggctacagttcgcagggtgcaaggtcaaagggcaatttgtgctcttgaatctggatta
actggcatgcttatgaaagaagattattcagatgattcaagagatatagaattgtctgac
agactgaacgagggcgacattctcacttgcaagatcaaatccattcaaaagaataggtat
caagttttcctaagttgtagagagagtgagatgagaaataaccgatatcagaacactcag
aatcttgatacctattaccatgaagaccgaagaagtttacagagtgagcaagataaagct
cataaggagaaagagcttgcgaagaagcatttcaagccaaggatgattgttcatcctcgc
ttccaaaatataactgcagatgaagcattgaagttcttgtctgataaggatcctggggaa
agtgttattcgtcctagttcccgggggccttcgtatttaactttgactctcaaggtttat
gatggagtgtatgctcacaaagacattgttgagggtggaaaggatcataaggatatcacg
agcttactccgcattgggaagaccttgaaaattggggaggacacctttgaggatttagat
gaggtgatggatcgttatgttgatcccttggtagctcacttgaaggcaattctaaattac
cgcaagttcaggaagggaacaaaacaagaggttgatgaacttttgaagatggagaaattg
gagtatccaatgaggattgtttattcttttgggatttcacatgaacatccaggcactttc
atcttgacgtatatacgcagtacaaatccacaccatgagtatattggcctatatccgaag
ggattcaaattcagaaaaaggatgtttgaggacattgatcggcttttagcatattttcag
cgccatattgatgaccctcagcatgaatcaggaccatctattagatcagtcgctgctatg
gtgccgatacgaagccctgcagctgggggttcttcaggggcatctgtgggcagcggctgg
ggtggatcaactaatgagggtggttggagaggccagtcatttgatagggaccggtcatct
acaccgagttcacggacaggtcgaaatgatcatagaaatggcggtagtcgtgatgcgcat
ccaagcggcctccctagaccttatggtgggcgaggtcattgtcgaggaggatataacaac
agaggaaatagcactagcaatgagaggcaggattctggtaatgatgctcctgcgtggggt
tcagattccaaggatgcggatgatggtttgggcaattttccaggtgcaaaggtccaaaac
tcgcctggaagggaagctttccctggtggttggggtgctggtggaagtggcagtggaggt
ggtggcagtagctggggcagtggagctggctccagtggaaatgatgcgtggggtcaagga
attggcggtgcaggaggatggggtgtgtctggtgcaaatgatgcagctgcagctgctgat
aatgggacttcaggatggggttctagcgccaagaaaaaaggttctggtgctggagatttg
ggatggggttcagaaaccaaaagaagtaccccgtcccaatctggaaacagatggtctggg
actgacggcggtggtggttggtga

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