KEGG   Malus domestica (apple): 103426352
Entry
103426352         CDS       T03194                                 
Name
(RefSeq) ras-related protein RABF1 isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
mdm  Malus domestica (apple)
Pathway
mdm04144  Endocytosis
mdm04145  Phagosome
mdm04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103426352
   04145 Phagosome
    103426352
   04148 Efferocytosis
    103426352
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103426352
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mdm04147]
    103426352
   04031 GTP-binding proteins [BR:mdm04031]
    103426352
Membrane trafficking [BR:mdm04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    103426352
 Endosome - Lysosome transport
    103426352
Exosome [BR:mdm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103426352
  Exosomal proteins of other body fluids (saliva and urine)
   103426352
  Exosomal proteins of colorectal cancer cells
   103426352
  Exosomal proteins of bladder cancer cells
   103426352
GTP-binding proteins [BR:mdm04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    103426352
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16 TniB
Other DBs
NCBI-GeneID: 103426352
NCBI-ProteinID: XP_008362670
UniProt: A0A498JEF0
LinkDB
Position
07:complement(join(24622070..24622126,24622320..24622406,24622493..24622582,24623220..24623325,24623506..24623600,24623725..24623808,24624423..24624499,24624805..24624829))
AA seq 206 aa
MGCSASLPDRSSGRLAGPNSENGGASDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPDS
FNKAQYWVKELQKHGSPDIVLALVGNKADLHEKREVPVQDGIEYAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRPAPSTTQQNP
NT seq 621 nt   +upstreamnt  +downstreamnt
atgggttgctccgcctcccttccagataggagttcagggcggttggccgggccaaattcc
gagaacggtggagcttctgatgccaaaaatctccgtgtgaagctagttttgttgggtgat
tctggtgttggtaaaagctgtattgttctgcgttttgttcgtggtcagtttgaccccaca
tccaaggtgactgttggagcttcattcttgtcacagacgatagctttacaagattctaca
acagttaaatttgaaatatgggacactgcaggccaagagaggtatgctgcattggcccca
ctctattatcgtggtgctgcagttgcagttattgtatatgatataacaagtccagattct
ttcaacaaagcgcaatattgggttaaggagctgcagaaacatgggagccctgatattgtc
ttggccttggtcggtaacaaagctgatcttcatgagaaacgtgaagttcctgttcaagat
ggtattgaatatgcagaaaagaatggaatgttctttatcgagacatccgcaaagacagca
gataatattaatcagctgtttgaggaaattgccaagcgactaccccgtccagccccttca
acaacgcagcagaatccgtga

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